Secondary structure prediction information

sequence—that is, the prediction of its secondary and tertiary structure from primary structure. Structure prediction is different from the inverse problem...

Protein secondary structure is the local spatial conformation of the polypeptide backbone excluding the side chains. The two most common secondary structural...

Secondary structure prediction is a set of techniques in bioinformatics that aim to predict the secondary structures of proteins and nucleic acid sequences...

protein threading, ab initio methods, secondary structure prediction, and transmembrane helix and signal peptide prediction. Below is a list which separates...

Nucleic acid secondary structure is the basepairing interactions within a single nucleic acid polymer or between two polymers. It can be represented as...

This list of RNA structure prediction software is a compilation of software tools and web portals used for RNA structure prediction. The single sequence...

List of notable protein secondary structure prediction programs List of protein structure prediction software Protein structure prediction...

PSI-blast based secondary structure PREDiction (PSIPRED) is a method used to investigate protein structure. It uses artificial neural network machine learning...

Critical Assessment of Structure Prediction (CASP), sometimes called Critical Assessment of Protein Structure Prediction, is a community-wide, worldwide...

acid structure prediction is a computational method to determine secondary and tertiary nucleic acid structure from its sequence. Secondary structure can...

secondary structure of RNA molecules. Approaches include both experimental and computational methods (see also the List of RNA structure prediction software)...

In addition, it has been suggested that RNA secondary structure prediction helps splice site prediction. Artificial neural networks are computational...

without prediction, tertiary structures to within 5 Å (0.5 nm) for small proteins (<120 residues) and, under favorable conditions, confident secondary structure...

bioinformatics that is related to the analysis and prediction of the three-dimensional structure of biological macromolecules such as proteins, RNA,...

List of RNA structure prediction software List of software for protein model error verification List of protein secondary structure prediction programs List...

computational biology, de novo protein structure prediction refers to an algorithmic process by which protein tertiary structure is predicted from its amino acid...

Protein Secondary Structure Prediction Server which provides predictions by the JNet algorithm, one of the most accurate methods for secondary structure prediction...

of the discovery process and the library itself. RNA and DNA secondary structure prediction by dynamic programming algorithms such as RNAfold (ViennaRNA)...

Pierre, et al. "Exploiting the past and the future in protein secondary structure prediction." Bioinformatics 15.11 (1999): 937-946. Pollastri, Gianluca...

algorithms had to be programmed by hand; for problems such as protein structure prediction, this proved difficult. Machine learning techniques, such as deep...

web-based services for protein structure prediction. Phyre is among the most popular methods for protein structure prediction having been cited over 1500...

(2019). "NetSurfP-2.0: Improved prediction of protein structural features by integrated deep learning". Proteins: Structure, Function, and Bioinformatics...

on known homologous structures. It implements the most frequently used steps involved in modeling: secondary structure prediction, multiple-round psiblast...

8-state secondary structure prediction, sequence-template alignment, 3D structure prediction, solvent accessibility prediction, disorder prediction and binding...

developed to predict probable RNA secondary structures through structure ensemble sampling and centroid predictions with a focus on assessment of RNA...

Fasman Secondary Structure Prediction server. WIDE SPECTRUM: Research Journal. 1(9):15-19. Jumper, J et al. Highly accurate protein structure prediction with...