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List of protein structure prediction software information


Constituent amino-acids can be analyzed to predict secondary, tertiary and quaternary protein structure.

This list of protein structure prediction software summarizes notable used software tools in protein structure prediction, including homology modeling, protein threading, ab initio methods, secondary structure prediction, and transmembrane helix and signal peptide prediction.

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List of protein structure prediction software

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This list of protein structure prediction software summarizes notable used software tools in protein structure prediction, including homology modeling...

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Protein structure prediction

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Protein structure prediction is the inference of the three-dimensional structure of a protein from its amino acid sequence—that is, the prediction of...

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Protein tertiary structure

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conditions. A list of software for protein tertiary structure prediction can be found at List of protein structure prediction software. Protein aggregation...

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List of protein secondary structure prediction programs

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List of notable protein secondary structure prediction programs List of protein structure prediction software Protein structure prediction...

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List of RNA structure prediction software

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This list of RNA structure prediction software is a compilation of software tools and web portals used for RNA structure prediction. The single sequence...

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List of bioinformatics software

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List of protein-ligand docking software List of RNA structure prediction software List of software for protein model error verification List of protein secondary...

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De novo protein structure prediction

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computational biology, de novo protein structure prediction refers to an algorithmic process by which protein tertiary structure is predicted from its amino...

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Sequence analysis

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phylogenetic tree visualization software List of protein structure prediction software List of RNA structure prediction software Sequence analysis in social...

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RaptorX

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RaptorX is a software and web server for protein structure and function prediction that is free for non-commercial use. RaptorX is among the most popular...

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List of gene prediction software

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a list of software tools and web portals used for gene prediction. Gene prediction List of RNA structure prediction software Comparison of software for...

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Structural bioinformatics

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branch of bioinformatics that is related to the analysis and prediction of the three-dimensional structure of biological macromolecules such as proteins, RNA...

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Secondary structure prediction

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to: Protein structure prediction Nucleic acid structure prediction List of protein secondary structure prediction programs List of RNA structure prediction...

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PSIPRED

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Jpred Protein design Protein function prediction De novo protein structure prediction Molecular design software List of protein structure prediction software...

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Comparison of software for molecular mechanics modeling

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of force-field implementations Comparison of nucleic acid simulation software List of molecular graphics systems List of protein structure prediction...

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Comparison of nucleic acid simulation software

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software Molecule editor Quantum chemistry computer programs List of molecular graphics systems List of protein structure prediction software List of...

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List of disorder prediction software

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updated, shows the main features of software for disorder prediction. Note that different software use different definitions of disorder. Methods not available...

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Protein

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decades. Linus Pauling is credited with the successful prediction of regular protein secondary structures based on hydrogen bonding, an idea first put forth...

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List of mass spectrometry software

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spectrometry data format: for a list of mass spectrometry data viewers and format converters. List of protein structure prediction software Cox, Jürgen; Neuhauser...

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Gene prediction

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to date. List of gene prediction software Phylogenetic footprinting Protein function prediction Protein structure prediction Proteinprotein interaction...

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Link prediction

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between genes and proteins in a biological network. Link prediction can also have a temporal aspect, where, given a snapshot of the set of links at time t...

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Biomolecular structure

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the List of RNA structure prediction software). The tertiary structure of a protein or any other macromolecule is its three-dimensional structure, as...

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List of protein subcellular localization prediction tools

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This list of protein subcellular localisation prediction tools includes software, databases, and web services that are used for protein subcellular localization...

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GOR method

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is an information theory-based method for the prediction of secondary structures in proteins. It was developed in the late 1970s shortly after the...

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Outline of software

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List of protein structure prediction software List of manual image annotation tools List of mobile app distribution platforms List of Mobile Device Management...

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Molecular modelling

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Comparison of software for molecular mechanics modeling Density functional theory software List of molecular graphics systems List of protein structure prediction...

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Protein secondary structure

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secondary structure Translation Structural motif Protein circular dichroism data bank WHAT IF software List of protein secondary structure prediction programs...

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Jpred

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the latest version of the JPred Protein Secondary Structure Prediction Server which provides predictions by the JNet algorithm, one of the most accurate...

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MODELLER

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MaxMod is a standalone GUI for MODELLER on Windows. List of protein structure prediction software "MODELLER News". salilab.org. Retrieved 2022-11-02....

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