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List of bioinformatics software information


The list of bioinformatics software tools can be split up according to the license used:

  • List of proprietary bioinformatics software
  • List of open-source bioinformatics software

Alternatively, here is a categorization according to the respective bioinformatics subfield specialized on:

  • Sequence analysis software
    • List of sequence alignment software
    • List of alignment visualization software
    • Alignment-free sequence analysis
    • De novo sequence assemblers
    • List of gene prediction software
    • List of disorder prediction software
    • List of Protein subcellular localization prediction tools
    • List of phylogenetics software
    • List of phylogenetic tree visualization software
    • Category:Metagenomics_software
  • Structural biology software
    • List of molecular graphics systems
    • List of protein-ligand docking software
    • List of RNA structure prediction software
    • List of software for protein model error verification
    • List of protein secondary structure prediction programs
    • List of protein structure prediction software
    • Category:Molecular dynamics software
    • Structural alignment software
  • Other
    • Compression of genomic sequencing data
    • Bioinformatics workflow management system
    • List of genetic engineering software
    • List of systems biology visualization software
    • List of systems biology modelling software
    • 2D gel analysis software
    • List of mass spectrometry software

and 25 Related for: List of bioinformatics software information

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List of bioinformatics software

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The list of bioinformatics software tools can be split up according to the license used: List of proprietary bioinformatics software List of open-source...

Word Count : 174

List of proprietary bioinformatics software

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alignment software List of open-source bioinformatics software List of open-source healthcare software List of biomedical cybernetics software List of freeware...

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List of phylogenetics software

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"Reconstruction of clonal trees and tumor composition from multi-sample sequencing data". Bioinformatics. 31 (12): i62-70. doi:10.1093/bioinformatics/btv261....

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List of sequence alignment software

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protein or nucleotide Please see List of alignment visualization software. List of open source bioinformatics software Altschul SF, Gish W, Miller W, Myers...

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List of mass spectrometry software

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advanced software package to support high-throughput LC-MS peptide identification". Bioinformatics. 23 (15): 2021–3. doi:10.1093/bioinformatics/btm281....

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List of bioinformatics companies

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This is a list of bioinformatics companies that have articles at Wikipedia: Applied Maths provides the software suite BioNumerics Astrid Research BIOBASE...

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List of phylogenetic tree visualization software

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phylogeographic information on phylogenetic trees". Bioinformatics. 35 (17): 3163–3165. doi:10.1093/bioinformatics/btz011. PMID 30649190. Archived from the original...

Word Count : 1622

Bioinformatics

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Bioinformatics (/ˌbaɪ.oʊˌɪnfərˈmætɪks/ ) is an interdisciplinary field of science that develops methods and software tools for understanding biological...

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Open Bioinformatics Foundation

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Bioinformatics Foundation is a non-profit, volunteer-run organization focused on supporting open source programming in bioinformatics. The mission of...

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List of systems biology modeling software

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et al. (1999). "E-cell: software environment for whole-cell simulation". Bioinformatics. 15 (1): 72–84. doi:10.1093/bioinformatics/15.1.72. PMID 10068694...

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List of statistical software

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learning research Orange, a data mining, machine learning, and bioinformatics software Pandas – High-performance computing (HPC) data structures and data...

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List of biomedical cybernetics software

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homeostasis List of sequence alignment software List of open-source healthcare software List of open-source bioinformatics software List of proprietary...

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Structural alignment software

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detection of structurally similar protein binding sites by local structural alignment". Bioinformatics. 26 (9): 1160–1168. doi:10.1093/bioinformatics/btq100...

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BioRuby

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2010). "BioRuby: bioinformatics software for the Ruby programming language". Bioinformatics. 26 (20): 2617–9. doi:10.1093/bioinformatics/btq475. PMC 2951089...

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List of gene prediction software

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information and similarity with protein sequences". Bioinformatics. 16 (11): 960–967. doi:10.1093/bioinformatics/16.11.960. ISSN 1367-4803. PMID 11159307. Hyatt...

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Swiss Institute of Bioinformatics

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The SIB Swiss Institute of Bioinformatics is an academic not-for-profit foundation which federates bioinformatics activities throughout Switzerland. The...

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Short Oligonucleotide Analysis Package

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Package) is a suite of bioinformatics software tools from the BGI Bioinformatics department enabling the assembly, alignment, and analysis of next generation...

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List of RNA structure prediction software

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Browser: free software for distribution and exploration of genome-scale datasets". Bioinformatics. 25 (20): 2730–2731. doi:10.1093/bioinformatics/btp472. PMC 2759552...

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List of protein structure prediction software

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This list of protein structure prediction software summarizes notable used software tools in protein structure prediction, including homology modeling...

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List of disorder prediction software

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prediction of disordered regions with multilayer fusion of multiple information sources". Bioinformatics. 26 (18): i489–96. doi:10.1093/bioinformatics/btq373...

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List of software for protein model error verification

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This list of software for protein model error verification is a compilation of bioinformatics software frequently employed to check experimental and theoretical...

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Netherlands Bioinformatics Centre

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Netherlands Bioinformatics Centre or NBIC (2003-2013) was a Dutch, government-funded organization, that coordinated all academic work on bioinformatics in the...

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List of molecular graphics systems

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modeling List of microscopy visualization systems List of open-source bioinformatics software Molecular graphics Molecule editor O'Donoghue SI, Goodsell DS,...

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Software in the Public Interest

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and open-source software portal List of free and open-source software organizations "Software In The Public Interest Inc - Full text of "Full Filing" for...

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List of biological databases

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resource for the study of methionine residues sulfoxidation". Bioinformatics. 35 (22): 4849–4850. doi:10.1093/bioinformatics/btz462. PMC 6853639. PMID 31197322...

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