National Microbial Pathogen Data Resource information
This article has multiple issues. Please help improve it or discuss these issues on the talk page. (Learn how and when to remove these template messages)
This article is an orphan, as no other articles link to it. Please introduce links to this page from related articles; try the Find link tool for suggestions. (February 2024)
This article relies excessively on references to primary sources. Please improve this article by adding secondary or tertiary sources. Find sources: "National Microbial Pathogen Data Resource" – news · newspapers · books · scholar · JSTOR(December 2008) (Learn how and when to remove this message)
(Learn how and when to remove this message)
The National Microbial Pathogen Data Resource was one of the eight Bioinformatics Resource Centers funded by the National Institutes of Allergy and Infectious Diseases, NIAID a component of the National Institutes of Health (NIH), which is an agency of the United States Department of Health and Human Services.
The NMPDR was funded for five years from 2004 through a grant to co-PI's Rick Stevens from the Computation Institute at the University of Chicago, and Ross Overbeek at the Fellowship for the Interpretation of Genomes.
The NMPDR was initially tasked with annotating and curating the genomes of five pathogenic species of Bacteria, (Campylobacter, Listeria, Staphylococcus, Streptococcus, and Vibrio). However, after four years, the team were asked to also oversee the curation and annotation of the genomes of seven additional bacterial species (Chlamydia, Chlamydophila, Haemophilus, Mycoplasma, Neisseria, Treponema, and Ureaplasma).
The flagship website, the National Microbial Pathogen Data Resource provides curated annotations in an environment for comparative analysis of genomes and biological subsystems.
In addition, the NMPDR team have also developed the Rapid Annotation using Subsystems Technology Server (RAST) for annotating and curating complete microbial genomes and the Metagenomics RAST for annotating metagenomes.
and 28 Related for: National Microbial Pathogen Data Resource information
The NationalMicrobialPathogenDataResource was one of the eight Bioinformatics Resource Centers funded by the National Institutes of Allergy and Infectious...
dicarboxylate metabolism". at KEGG. "Subsystem: Glyoxylate bypass". NationalMicrobialPathogenDataResource. Archived from the original on 2011-10-05. v t e...
September 2022 it was announced that the Centre for Genomic Pathogen Surveillance, part of the Big Data Institute at the University of Oxford, was awarded funding...
community genomics or microbiomics. While traditional microbiology and microbial genome sequencing and genomics rely upon cultivated clonal cultures, early...
Microbial ecology (or environmental microbiology) is the ecology of microorganisms: their relationship with one another and with their environment. It...
institution, to establish the NationalMicrobialPathogenDataResource Center with an $18 million federal grant. American National Standard COBOL. with Wilson...
resistance to a specific pathogen led to a 2007 proposal, that a dynamic relationship exists between corals and their symbiotic microbial communities. It is...
A renewable resource (also known as a flow resource) is a natural resource which will replenish to replace the portion depleted by usage and consumption...
(limited irrigation), the increase in exopolysaccharide production and microbial activity affected water retention in the soil and field performance of...
species placed in Aspergillus include: Aspergillus flavus is a notable plant pathogen impacting crop yields and a common cause of aspergillosis. Aspergillus...
The Viral Bioinformatics Resource Center (VBRC) is an online resource providing access to a database of curated viral genomes and a variety of tools for...
RE, Bernstein H, Nedelcu AM (May 2008). "Adaptive value of sex in microbialpathogens" (PDF). Infection, Genetics and Evolution. 8 (3): 267–85. doi:10...
developed to classify microbial communities according to the health condition of the host, regardless of the type of sequence data, e.g. 16S rRNA or whole-genome...
organism PHI-base: pathogen-host interaction database. It links gene information to phenotypic information from microbialpathogens on their hosts. Information...
Microbial electrochemical technologies (METs) use microorganisms as electrochemical catalyst, merging the microbial metabolism with electrochemical processes...
encyclopaedic resource of scientific information Invasive Species, National Invasive Species Information Center, United States National Agricultural Library...
structure of rhizosphere microbial communities can aid in the resistance of plants to soil-borne pathogens. Other pathogen reductions include the mitigation...
Heitman J (September 2006). "Sexual reproduction and the evolution of microbialpathogens". Current Biology. 16 (17): R711–25. Bibcode:2006CBio...16.R711H...
of specific pathogens. In one study by Chakravorty et al. in 2007, the authors characterized the V1–V8 regions of a variety of pathogens in order to determine...
of data accessible to researchers, and it has raised ethical questions about the wisdom of reconstructing previously extinct and deadly pathogens in order...
that there had been no instances of illness or disease from either microbialpathogens or chemicals, and the risks of using reclaimed water for irrigation...
microbiology results have helped to identify the etiologic pathogen and/or antimicrobial susceptibility data are available, every attempt should be made to narrow...
fragments of multiple housekeeping genes to characterize isolates of microbial species. The first MLST scheme to be developed was for Neisseria meningitidis...
support microbial growth and can become secondary reservoirs of infection, though species are mostly those that threaten "at risk" groups. Pathogens (such...
a number of microbial factors that may cause the typical septic inflammatory cascade. An invading pathogen is recognized by its pathogen-associated molecular...
adequate attention to plant family is essential to mitigating pests and pathogens. However, many farmers have success managing rotations by planning sequencing...
RE, Bernstein H, Nedelcu AM (May 2008). "Adaptive value of sex in microbialpathogens". Infect Genet Evol. 8 (3): 267–285. doi:10.1016/j.meegid.2008.01...
Smaller particles can carry airborne pathogens for extended periods of time. While the concentration of airborne pathogens is greater within 2m, they can travel...