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List of biological databases information


Biological databases are stores of biological information.[1] The journal Nucleic Acids Research regularly publishes special issues on biological databases and has a list of such databases. The 2018 issue has a list of about 180 such databases and updates to previously described databases.[2] Omics Discovery Index can be used to browse and search several biological databases. Furthermore, the NIAID Data Ecosystem Discovery Portal developed by the National Institute of Allergy and Infectious Diseases (NIAID) enables searching across databases.

  1. ^ Wren JD, Bateman A (October 2008). "Databases, data tombs and dust in the wind". Bioinformatics. 24 (19): 2127–8. doi:10.1093/bioinformatics/btn464. PMID 18819940.
  2. ^ "Volume 46 Issue D1 | Nucleic Acids Research | Oxford Academic". academic.oup.com. Retrieved 2018-09-04.

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List of biological databases

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biological databases and has a list of such databases. The 2018 issue has a list of about 180 such databases and updates to previously described databases. Omics...

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Biological database

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Biological databases are libraries of biological sciences, collected from scientific experiments, published literature, high-throughput experiment technology...

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Lists of databases

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a list of lists of databases or databanks: List of academic databases and search engines List of biodiversity databases List of biological databases List...

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List of biodiversity databases

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This is a list of biodiversity databases. Biodiversity databases store taxonomic information alone or more commonly also other information like distribution...

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Sequence database

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ordered list which can often carry a lack of biological significance. FASTA format SIMAP List of biological databases Bioinformatics Cochrane, G.; Karsch-Mizrachi...

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List of academic databases and search engines

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This article contains a representative list of notable databases and search engines useful in an academic setting for finding and accessing articles in...

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Taxonomic database

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and information retrieval. Taxonomic databases are routinely used for the automated construction of biological checklists such as floras and faunas,...

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Protein structure database

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structures, providing the biological community access to the experimental data in a useful way. Data included in protein structure databases often includes three-dimensional...

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List of neuroscience databases

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A number of online neuroscience databases are available which provide information regarding gene expression, neurons, macroscopic brain structure, and...

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Graph database

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to 1970s network model databases in that both represent general graphs, but network-model databases operate at a lower level of abstraction and lack easy...

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Computational biology

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International Society for Computational Biology List of bioinformatics institutions List of biological databases Mathematical biology Monte Carlo method Molecular...

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List of chemical databases

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This is a list of websites that contain lists of chemicals, or databases of chemical information. There is further detail on the content of these and...

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International Nucleotide Sequence Database Collaboration

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INSD entry at the EMBL-EBI database; the same entry at NCBI. Bioinformatics Biological database List of biological databases National Center for Biotechnology...

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Ensembl genome database project

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Ensembl database website is mirrored at four different locations worldwide to improve the service. List of sequenced eukaryotic genomes List of biological databases...

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Microarray databases

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various sources) Some of the most known public, curated microarray databases are: Biological database List of biological databases DNA microarray DNA microarray...

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List of databases for oncogenomic research

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Microarray databases. Cancer Research List of biological databases Microarray databases Oncogenomics Oncology Only contains references to biological data The...

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Computational history

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International Society for Computational Biology List of bioinformatics institutions List of biological databases Bioinformatics Biostatistics Computational...

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Model organism database

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Model organism databases (MODs) are biological databases, or knowledgebases, dedicated to the provision of in-depth biological data for intensively studied...

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List of Drosophila databases

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development of a number of online databases for the storage and curation of certain biological data. The Drosophila Interactions Database (DroID) is an...

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Lists of websites

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This is a list of lists of websites, sorted by type and subject, including comparisons and other lists of lists. Academic databases and search engines...

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Microsatellite

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frequency of homozygotes causing deviations from Hardy-Weinberg equilibrium expectations. Genetic marker Junk DNA List of biological databases Long interspersed...

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CLIPZ

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England: D245-52. doi:10.1093/nar/gkq940. PMC 3013791. PMID 21087992. RNA-binding protein List of biological databases http://www.clipz.unibas.ch v t e...

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Gene Disease Database

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gene-disease mechanisms. Gene Disease Databases integrate human gene-disease associations from various expert curated databases and text mining derived associations...

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List of unusual biological names

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This is a list of unusual biological names, given to biological inventions and discoveries. One might consider the listed names unusual due to their containing...

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GenBank

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available, quality-controlled, web-based public databases, such as the EzTaxon-e and the BIBI databases. The results showed that analyses performed using...

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List of biology websites

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This is an annotated list of biological websites, including only notable websites dealing with biology generally and those with a more specific focus....

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Human Genome Project

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OrganizationPages displaying short descriptions of redirect targets Human Variome Project List of biological databases Neanderthal genome project – Effort to sequence...

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Swiss Institute of Bioinformatics

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campus List of biological databases Science and technology in Switzerland SWISS-PROT funding crisis of 1996, on the website of the Swiss-Prot database. Last...

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