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Genotype information


The genotype of an organism is its complete set of genetic material.[1] Genotype can also be used to refer to the alleles or variants an individual carries in a particular gene or genetic location.[2] The number of alleles an individual can have in a specific gene depends on the number of copies of each chromosome found in that species, also referred to as ploidy. In diploid species like humans, two full sets of chromosomes are present, meaning each individual has two alleles for any given gene. If both alleles are the same, the genotype is referred to as homozygous. If the alleles are different, the genotype is referred to as heterozygous.

Genotype contributes to phenotype, the observable traits and characteristics in an individual or organism.[3] The degree to which genotype affects phenotype depends on the trait. For example, the petal color in a pea plant is exclusively determined by genotype. The petals can be purple or white depending on the alleles present in the pea plant.[4] However, other traits are only partially influenced by genotype. These traits are often called complex traits because they are influenced by additional factors, such as environmental and epigenetic factors. Not all individuals with the same genotype look or act the same way because appearance and behavior are modified by environmental and growing conditions. Likewise, not all organisms that look alike necessarily have the same genotype.

The term genotype was coined by the Danish botanist Wilhelm Johannsen in 1903.[5]

  1. ^ "What is genotype? What is phenotype? – pgEd". pged.org. Retrieved 2020-06-22.
  2. ^ "Genotype". Genome.gov. Retrieved 2021-11-09.
  3. ^ Pierce, Benjamin (2020). Genetics A Conceptual Approach. NY, New York: Macmillian. ISBN 978-1-319-29714-5.
  4. ^ Alberts B, Bray D, Hopkin K, Johnson A, Lewis J, Raff M, Roberts K, Walter P (2014). Essential Cell Biology (4th ed.). New York, NY: Garland Science. p. 659. ISBN 978-0-8153-4454-4.
  5. ^ Johannsen W (1903). "Om arvelighed i samfund og i rene linier". Oversigt Birdy over Det Kongelige Danske Videnskabernes Selskabs Forhandlingerm (in Danish). 3: 247–70. German ed. "Erblichkeit in Populationen und in reinen Linien" (in German). Jena: Gustav Fischer. 1903. Archived from the original on 2009-05-30. Retrieved 2017-07-19.. Also see his monograph Johannsen W (1905). Arvelighedslærens elementer horse [The Elements of Heredity] (in Danish). Copenhagen.{{cite book}}: CS1 maint: location missing publisher (link) which was rewritten, enlarged and translated into German as Johannsen W (1905). Elemente der exakten Erblichkeitslehre (in German). Jena: Gustav Fischer. Archived from the original on 2009-05-30. Retrieved 2017-07-19.

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Genotype

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Look up genotype in Wiktionary, the free dictionary. The genotype of an organism is its complete set of genetic material. Genotype can also be used to...

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Genotyping

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Genotyping is the process of determining differences in the genetic make-up (genotype) of an individual by examining the individual's DNA sequence using...

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Genotype frequency

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allele frequencies and genotype frequencies. Genotype frequency in a population is the number of individuals with a given genotype divided by the total...

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Multilocus genotype

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A multilocus genotype is the combination of alleles found at two or more loci in a single individual. For example, in a diploid species, if there are two...

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SNP genotyping

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SNP genotyping is the measurement of genetic variations of single nucleotide polymorphisms (SNPs) between members of a species. It is a form of genotyping...

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Phenotype

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from two basic factors: the expression of an organism's genetic code (its genotype) and the influence of environmental factors. Both factors may interact...

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Genotyping by sequencing

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sequencing, genotyping by sequencing, also called GBS, is a method to discover single nucleotide polymorphisms (SNP) in order to perform genotyping studies...

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Hepatitis C virus

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virological responses occur in 70% of genotype 1 cases, ~90% of genotypes 2 and 3, ~65% of genotype 4 and ~80% of genotype 6. In addition, people of African...

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Probabilistic genotyping

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Probabilistic genotyping is the use of statistical methods and mathematical algorithms in DNA Profiling. It may be used instead of manual methods in difficult...

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HCV genotypes

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Hepatitis C virus (HCV) genotypes refer to the genetic variations that occurs in the hepatitis C virus. Hepatitis C is a contagious disease that primarily...

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Allele

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heterozygous genotypes), "Type B" (produced by IBIB homozygous and IBi heterozygous genotypes), "Type AB" produced by IAIB heterozygous genotype, and "Type...

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Thrifty gene hypothesis

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and famine).[citation needed] According to the hypothesis, the 'thrifty' genotype would have been advantageous for hunter-gatherer populations, especially...

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Noninvasive genotyping

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Noninvasive genotyping is a modern technique for obtaining DNA for genotyping that is characterized by the indirect sampling of specimen, not requiring...

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Mendelian inheritance

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which can visually demonstrate all the possible genotypes that an offspring can receive, given the genotypes of their parents. Each parent carries two alleles...

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Allele frequency

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frequency is distinct from the genotype frequency, although they are related, and allele frequencies can be calculated from genotype frequencies. In population...

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XXYY syndrome

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XXYY syndrome is a sex chromosome anomaly in which males have 2 extra chromosomes, one X and one Y chromosome. Human cells usually contain two sex chromosomes...

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Hepatitis C

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genotype. In the United States, about 70% of cases are caused by genotype 1, 20% by genotype 2 and about 1% by each of the other genotypes. Genotype 1...

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Zygosity

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hemizygous are used to describe the genotype of a diploid organism at a single locus on the DNA. Homozygous describes a genotype consisting of two identical alleles...

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Punnett square

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The Punnett square is a square diagram that is used to predict the genotypes of a particular cross or breeding experiment. It is named after Reginald...

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Influenza A virus subtype H5N1

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strain of HPAI A(H5N1) in 2004 evolved from 1999 to 2002 creating the Z genotype. It has also been called "Asian lineage HPAI A(H5N1)". Asian lineage HPAI...

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Genetic representation

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suitable genotype-phenotype mapping: All possible admissible solutions must be contained in the search space. When more possible genotypes exist than...

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