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Eukaryotic ribosome information


Rendering of a crystal structure.
Eukaryotic ribosome. The 40S subunit is on the left, the 60S subunit on the right. The ribosomal RNA (rRNA) core is represented as a grey tube, expansion segments are shown in red. Universally conserved proteins are shown in blue. These proteins have homologs in eukaryotes, archaea and bacteria. Proteins shared only between eukaryotes and archaea are shown in orange, and proteins specific to eukaryotes are shown in red. PDB identifiers 4a17, 4A19, 2XZM aligned to 3U5B, 3U5C, 3U5D, 3U5E

Ribosomes are a large and complex molecular machine that catalyzes the synthesis of proteins, referred to as translation. The ribosome selects aminoacylated transfer RNAs (tRNAs) based on the sequence of a protein-encoding messenger RNA (mRNA) and covalently links the amino acids into a polypeptide chain. Ribosomes from all organisms share a highly conserved catalytic center. However, the ribosomes of eukaryotes (animals, plants, fungi, and large number unicellular organisms all with a nucleus) are much larger than prokaryotic (bacterial and archaeal) ribosomes and subject to more complex regulation and biogenesis pathways.[1][2] Eukaryotic ribosomes are also known as 80S ribosomes, referring to their sedimentation coefficients in Svedberg units, because they sediment faster than the prokaryotic (70S) ribosomes. Eukaryotic ribosomes have two unequal subunits, designated small subunit (40S) and large subunit (60S) according to their sedimentation coefficients. Both subunits contain dozens of ribosomal proteins arranged on a scaffold composed of ribosomal RNA (rRNA). The small subunit monitors the complementarity between tRNA anticodon and mRNA, while the large subunit catalyzes peptide bond formation.

  1. ^ "Difference Between 70S Ribosomes and 80S Ribosomes, RNA, Micromolecules". www.microbiologyprocedure.com. Archived from the original on 2008-09-05. Retrieved 2009-08-06.
  2. ^ "80S Ribosomes, Eukaryotic Ribosomes, Prokaryotic Ribosomes, Nucleic Acids, Sedimentation Coefficient". www.microbiologyprocedure.com. Archived from the original on 2009-06-23. Retrieved 2009-08-06.

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Eukaryotic ribosome

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and archaeal) ribosomes and subject to more complex regulation and biogenesis pathways. Eukaryotic ribosomes are also known as 80S ribosomes, referring to...

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Ribosome

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Prokaryotic ribosomes are around 20 nm (200 Å) in diameter and are composed of 65% rRNA and 35% ribosomal proteins. Eukaryotic ribosomes are between 25...

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Internal ribosome entry site

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as distinct regions of RNA molecules that are able to recruit the eukaryotic ribosome to the mRNA. This process is also known as cap-independent translation...

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Ribosome biogenesis

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responsible for mRNA translation into proteins. The eukaryotic ribosome, also called the 80S ribosome, is made up of two subunits – the large 60S subunit...

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Eukaryotic translation

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and cytoplasm). Eukaryotic mRNA precursors must be processed in the nucleus (e.g., capping, polyadenylation, splicing) in ribosomes before they are exported...

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5S ribosomal RNA

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PMID 32865340. Turowski TW, Tollervey D (2015). "Cotranscriptional events in eukaryotic ribosome synthesis". Wiley Interdisciplinary Reviews. RNA. 6 (1): 129–139...

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Protein synthesis inhibitor

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(either the ribosome itself or the translation factor), taking advantages of the major differences between prokaryotic and eukaryotic ribosome structures...

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Ribosomal RNA

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contains a 108‐nucleotide insertion in the ribosomes of the halophilic archaeon Halococcus morrhuae. A eukaryotic SSU contains the 18S rRNA subunit, which...

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Eukaryotic transcription

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Eukaryotic transcription is the elaborate process that eukaryotic cells use to copy genetic information stored in DNA into units of transportable complementary...

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Eukaryote

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symbiogenesis with a cyanobacterium created the plants, with chloroplasts. Eukaryotic cells contain membrane-bound organelles such as the nucleus, the endoplasmic...

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Eukaryotic initiation factor

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large 60S ribosomal subunit recruitment to form the 80S ribosome. There exist many more eukaryotic initiation factors than prokaryotic initiation factors...

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Organelle

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cell fractionation. There are many types of organelles, particularly in eukaryotic cells. They include structures that make up the endomembrane system (such...

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Chloroplast

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promoters within the chloroplast genome. The ribosomes in chloroplasts are similar to bacterial ribosomes. Because so many chloroplast genes have been...

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Eukaryotic initiation factor 4F

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CS (July 2015). "Quantitative studies of mRNA recruitment to the eukaryotic ribosome". Biochimie. 114: 58–71. doi:10.1016/j.biochi.2015.02.017. PMC 4458453...

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Ribosomal protein

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proteins and facilitate their import into the nucleus. Assembly of the eukaryotic ribosome appears to be driven by the ribosomal proteins in vivo when assembly...

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Ricin

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cannot enter the cell and do damage to ribosomes. Ricin B chain binds complex carbohydrates on the surface of eukaryotic cells containing either terminal...

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Kozak consensus sequence

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This recruitment to the m7G 5′ cap is supported by the inability of eukaryotic ribosomes to translate circular mRNA, which has no 5′ end. Once the PIC binds...

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Nucleolus

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structure in the nucleus of eukaryotic cells. It is best known as the site of ribosome biogenesis, which is the synthesis of ribosomes. The nucleolus also participates...

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Messenger RNA

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transport to the cytoplasm and its translation by the ribosome. The extensive processing of eukaryotic pre-mRNA that leads to the mature mRNA is the RNA splicing...

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Release factor

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rotation of RF3. Cryo-EM structures have been obtained for eukaryotic mamallian 80S ribosome bound to eRF1 and/or eRF3, providing a view of structural...

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Ribosome display

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1016/j.jim.2004.04.008. PMID 15261571. He, M.; Taussig, M. (2007). "Eukaryotic ribosome display with in situ DNA recovery". Nature Methods. 4 (3): 281–288...

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28S ribosomal RNA

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for the large subunit (LSU) of eukaryotic cytoplasmic ribosomes, and thus one of the basic components of all eukaryotic cells. It has a size of 25S in...

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Eukaryogenesis

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Eukaryogenesis, the process which created the eukaryotic cell and lineage, is a milestone in the evolution of life, since eukaryotes include all complex...

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