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CATH database information


CATH
Content
DescriptionProtein Structure Classification
Contact
Research centerUniversity College London
LaboratoryInstitute of Structural and Molecular Biology
Primary citationDawson et al. (2016) [1]
Release date1997
Access
Websitecathdb.info
Download URLcathdb.info/download
Miscellaneous
Data release
frequency
CATH-B is released daily. Official releases are approximately annual.
Version4.3
Schematic representation of the three top levels of the CATH classification scheme.[2]

The CATH Protein Structure Classification database is a free, publicly available online resource that provides information on the evolutionary relationships of protein domains. It was created in the mid-1990s by Professor Christine Orengo and colleagues including Janet Thornton and David Jones,[2] and continues to be developed by the Orengo group at University College London. CATH shares many broad features with the SCOP resource, however there are also many areas in which the detailed classification differs greatly.[3][4][5][6]

  1. ^ Dawson NL, Lewis TE, Das S, Lees JG, Lee D, Ashford P, et al. (January 2017). "CATH: an expanded resource to predict protein function through structure and sequence". Nucleic Acids Research. 45 (D1): D289–D295. doi:10.1093/nar/gkw1098. PMC 5210570. PMID 27899584.
  2. ^ a b Orengo CA, Michie AD, Jones S, Jones DT, Swindells MB, Thornton JM (August 1997). "CATH--a hierarchic classification of protein domain structures". Structure. 5 (8). London, England: 1093–108. doi:10.1016/s0969-2126(97)00260-8. PMID 9309224.
  3. ^ "CATH: Protein Structure Classification Database at UCL". Cathdb.info. Retrieved 9 March 2017.
  4. ^ "CATH". Cathdb.info. Retrieved 9 March 2017.
  5. ^ "CATH Database (@CATHDatabase)". Twitter. Retrieved 9 March 2017.
  6. ^ Pearl FM, Bennett CF, Bray JE, Harrison AP, Martin N, Shepherd A, et al. (January 2003). "The CATH database: an extended protein family resource for structural and functional genomics". Nucleic Acids Research. 31 (1): 452–455. doi:10.1093/nar/gkg062. PMC 165509. PMID 12520050.

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comparison of protein structures. CATH SCOP Holm L, Ouzounis C, Sander C, Tuparev G, Vriend G (1992). "A database of protein structure families with...

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and are assumed to have a closer common ancestor. Similar to CATH and Pfam databases, SCOP provides a classification of individual structural domains...

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second-year Rider, he is a squad leader in the Fourth Wing. Through his bond with Cath, he can read memories upon touching another person. Rhiannon Matthias: A...

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structure data to the PDB. Many other databases use protein structures deposited in the PDB. For example, SCOP and CATH classify protein structures, while...

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Alpha solenoid

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Classification of Proteins (SCOP) database describes these proteins using the term "alpha alpha superhelix". The CATH database uses the term "alpha horseshoe"...

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Janet Thornton

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N; Shepherd, A; Sillitoe, I; Thornton, J; Orengo, C. A. (2003). "The CATH database: An extended protein family resource for structural and functional genomics"...

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Catherine Noakes

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S791–S800. doi:10.1098/rsif.2009.0305.focus. PMC 2843948. PMID 19812072. "Cath Noakes - Healthcare Infection Society". www.his.org.uk. Retrieved 4 May 2020...

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Million Dollar Baby

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Reflects on His Career Los Angeles Magazine". Los Angeles Magazine. Clarke, Cath (January 6, 2011). "Paul Haggis: 'You have to question your beliefs'". The...

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