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Group III intron information


Group III intron is a class of introns found in mRNA genes of chloroplasts in euglenid protists. They have a conventional group II-type dVI with a bulged adenosine, a streamlined dI, no dII-dV, and a relaxed splice site consensus.[1]: fig. 2  Splicing is done with two transesterification reactions with a dVI bulged adenosine as initiating nucleophile; the intron is excised as a lariat.[2] Not much is known about how they work,[1] although an isolated chloroplast transformation system has been constructed.[3]

  1. ^ a b Copertino DW, Hallick RB (December 1993). "Group II and group III introns of twintrons: potential relationships with nuclear pre-mRNA introns". Trends Biochem. Sci. 18 (12): 467–71. doi:10.1016/0968-0004(93)90008-b. PMID 8108859.
  2. ^ Cite error: The named reference pmid7512259 was invoked but never defined (see the help page).
  3. ^ Doetsch, NA; Favreau, MR; Kuscuoglu, N; Thompson, MD; Hallick, RB (February 2001). "Chloroplast transformation in Euglena gracilis: splicing of a group III twintron transcribed from a transgenic psbK operon". Current Genetics. 39 (1): 49–60. doi:10.1007/s002940000174. PMID 11318107. S2CID 6413004.

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Group III intron

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Group III intron is a class of introns found in mRNA genes of chloroplasts in euglenid protists. They have a conventional group II-type dVI with a bulged...

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Intron

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are four main types of introns: tRNA introns, group I introns, group II introns, and spliceosomal introns (see below). Introns are rare in Bacteria and...

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Group III

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Baltimore classification. Group III introns, a class of introns found in mRNA genes of chloroplasts in euglenoid protists. Group III motor oil base stock as...

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Group I catalytic intron

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Group I introns are large self-splicing ribozymes. They catalyze their own excision from mRNA, tRNA and rRNA precursors in a wide range of organisms....

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Group II intron

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Group II introns are a large class of self-catalytic ribozymes and mobile genetic elements found within the genes of all three domains of life. Ribozyme...

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Twintron

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individual group III introns has been characterized. The external intron was interrupted by an internal intron containing two additional introns. In 1995...

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RNA splicing

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are three kinds of self-splicing introns, Group I, Group II and Group III. Group I and II introns perform splicing similar to the spliceosome without...

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Alan Lambowitz

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between intron encoded proteins and the size of group 2 introns seen in host cells. When these introns are capable of encoding for their own intron encoded...

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Nucleic acid tertiary structure

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core of the group II intron shown in the figure at left (ii) a catalytically essential triple helix observed in human telomerase RNA (iii) the SAM-II...

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Familial dysautonomia

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The most common FD-causing mutation occurs in intron 20 of the donor gene. Conversion of T→C in intron 20 of the donor gene resulted in shift splicing...

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Begonia

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the Afro-Malagasy Members of the Large Genus Begonia Inferred from trnL Intron Sequences A Phylogeny of Begonia Using Nuclear Ribosomal Sequence Data and...

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Hammerhead ribozyme

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These hammerhead ribozymes (the so-called HH9 and HH10) occur in the introns of a few specific genes and point to a preserved biological role during...

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U6 spliceosomal RNA

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and catalytic mechanism of U6 snRNA resembles that of domain V of group II introns. The formation of the triple helix in U6 snRNA is deemed to be important...

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Transfer RNA

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structure motif that is important for recognition and precise splicing of tRNA intron by endonucleases. This motif position and structure are evolutionarily conserved...

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VS ribozyme

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Neurospora. VS ribozyme contains features of both catalytic RNAs and group 1 introns. VS ribozyme has both cleavage and ligation activity and can perform...

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Dilleniaceae

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Dilleniaceae Using Sequence Data from Four Plastid Loci (rbcL, infA, rps4, rpl16 Intron)". International Journal of Plant Sciences. 170 (6): 794–813. doi:10.1086/599239...

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Virusoid

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several structural and sequence homologies to the group I introns such as the self-splicing intron of Tetrahymena thermophila. A phylogeny based on a...

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List of homing endonuclease cutting sites

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homing endonucleases are a special type of restriction enzymes encoded by introns or inteins. They act on the cellular DNA of the cell that synthesizes them;...

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Small nuclear RNA

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U12-type introns. The two types of introns mainly differ in their splicing sites: U2-type introns have GT-AG 5′ and 3′ splice sites while U12-type introns have...

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Capping enzyme

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recruitment of machinery necessary for RNA splicing, a process by which introns are removed to produce a mature mRNA. The addition of the cap onto mRNA...

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Begoniaceae

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the Afro-Malagasy members of the large genus Begonia inferred from trnL intron sequences". Systematic Botany. 28 (4): 693–704. doi:10.1043/02-56.1 (inactive...

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Alstroemeriaceae

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(2003). "The phylogeny of the Alstroemeriaceae, based on morphology, rps16 intron, and rbcL sequence data". Syst. Bot. 28 (58). Sanso, A. M.; C. C. Xifreda...

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Gene

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responsible for production of the functional product. The discovery of introns in the 1970s meant that many eukaryotic genes were much larger than the...

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Interferon type I

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pegylated IFNα for clinical use; e.g., IFNα2a (Roferon-A, Roche), IFNα2b (Intron-A, Schering-Plough) and pegylated IFNα2b (Sylatron, Schering Corporation)...

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History of RNA biology

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at or near the intron-insertion site of alleles lacking an intron. Mobile introns are frequently members of either the group I or group II families of...

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Platanus

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southwesternmost populations of P. occidentalis s.l. – carries nuclear intron sequences (second intron of the Leafy gene) of PNA-E origin. It lacks the plastid haplotype...

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Lentibulariaceae

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"Molecular Phylogenetics of Lentibulariaceae Inferred from Plastid rps16 Intron and trnL-F DNA Sequences: Implications for Character Evolution and Biogeography"...

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