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Cosmid information


A cosmid is a type of hybrid plasmid that contains a Lambda phage cos sequence.[1] Often used as cloning vectors in genetic engineering, cosmids can be used to build genomic libraries. They were first described by Collins and Hohn in 1978.[2] Cosmids can contain 37 to 52 (normally 45) kb of DNA, limits based on the normal bacteriophage packaging size. They can replicate as plasmids if they have a suitable origin of replication (ori): for example SV40 ori in mammalian cells, ColE1 ori for double-stranded DNA replication, or f1 ori for single-stranded DNA replication in prokaryotes. They frequently also contain a gene for selection such as antibiotic resistance, so that the transformed cells can be identified by plating on a medium containing the antibiotic. Those cells which did not take up the cosmid would be unable to grow.[3]

Unlike plasmids, they can also be packaged in vitro into phage capsids, a step which requires cohesive ends, also known as cos sites also used in cloning with a lambda phage as a vector, however nearly all the lambda genes have been deleted with the exception of the cos sequence. The hybrid cosmid DNA in the capsids can then be transferred into bacterial cells by transduction. Since there is a requirement for in vitro packaging whereby at least 38 kb of DNA is required between the cos sites, the vector without insert DNA will not be packaged (plasmids instability is increased if the novel inserted DNA contains many direct repeats or palindromic (inverted repeats) DNA. This instability can largely be counteracted by using a host bacterium with specific mutations affecting DNA recombination (N.B. Absence of inverted repeats was noted in the first Hohn & Collins publication cited above; see also[4]).

  1. ^ Hohn B, Murray K (August 1977). "Packaging recombinant DNA molecules into bacteriophage particles in vitro". Proceedings of the National Academy of Sciences of the United States of America. 74 (8): 3259–63. Bibcode:1977PNAS...74.3259H. doi:10.1073/pnas.74.8.3259. PMC 431522. PMID 333431.
  2. ^ Collins J, Hohn B (September 1978). "Cosmids: a type of plasmid gene-cloning vector that is packageable in vitro in bacteriophage lambda heads". Proceedings of the National Academy of Sciences of the United States of America. 75 (9): 4242–6. Bibcode:1978PNAS...75.4242C. doi:10.1073/pnas.75.9.4242. PMC 336088. PMID 360212.
  3. ^ "Cosmids". Phillip McClean. Retrieved April 4, 2014.
  4. ^ Collins J (1981). "Instability of palindromic DNA in Escherichia coli". Cold Spring Harbor Symposia on Quantitative Biology. 45 Pt 1: 409–16. doi:10.1101/SQB.1981.045.01.055. PMID 6271486.

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Cosmid

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A cosmid is a type of hybrid plasmid that contains a Lambda phage cos sequence. Often used as cloning vectors in genetic engineering, cosmids can be used...

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Animal

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Plant

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Genomic library

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coverage. Cosmid vectors are plasmids that contain a small region of bacteriophage λ DNA called the cos sequence. This sequence allows the cosmid to be packaged...

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Eukaryote

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Cloning vector

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vectors in E. coli include plasmids, bacteriophages (such as phage λ), cosmids, and bacterial artificial chromosomes (BACs). Some DNA, however, cannot...

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Bacteria

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Genome survey sequence

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lower accuracy. It includes RAPD, RFLP, AFLP and so on. Cosmid/BAC/YAC end sequences use Cosmid/Bacterial artificial chromosome/Yeast artificial chromosome...

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Life

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Polymerase chain reaction

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technologies involving the insertion of a DNA sequence into a plasmid, phage, or cosmid (depending on size) or the genetic material of another organism. Bacterial...

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Transposable element

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Protist

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Fungus

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Cell division

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transposon Plasmid Fertility Resistance Col Degradative Virulence/Ti Cryptic Cosmid Fosmid Phagemid Group I intron Group II intron Retrozyme Other aspects DNA...

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Virus

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Prion

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Viroid

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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HeLa

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Fosmid

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Fosmids are similar to cosmids but are based on the bacterial F-plasmid. The cloning vector is limited, as a host (usually E. coli) can only contain one...

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Mitochondrion

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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DNA replication

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transposon Plasmid Fertility Resistance Col Degradative Virulence/Ti Cryptic Cosmid Fosmid Phagemid Group I intron Group II intron Retrozyme Other aspects DNA...

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Archaea

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Tandem repeat

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Phagemid

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Extrachromosomal array

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extrachromosomal array is a method for mosaic analysis in genetics. It is a cosmid, and contains two functioning (wild-type) closely linked genes: a gene of...

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Coacervate

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Riboviria

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structures Bio-like structure Cancer cell HeLa Clonally transmissible cancer Cosmid Defective interfering particle Endogenous viral element Fosmid Integrative...

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Plasmid

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clone longer lengths of DNA, lambda phage with lysogeny genes deleted, cosmids, bacterial artificial chromosomes, or yeast artificial chromosomes are...

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