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Caenorhabditis elegans small RNAs information


Small RNAs (sRNAs) have been identified within the C. elegans genome and comparative genomics has shown that they are conserved across several nematode species. These sRNAs contain a characteristic 2,2,7-trimethylguanosine (TMG) cap structure that identifies them as non-coding RNAs that have a functional role within the cell but at present the exact function of these sRNAs is unknown. Immunoprecipitation using antibodies against TMG and RNA microarrays were used to identify these sRNA.[1]

  1. ^ Jia, D.; Cai, L.; He, H.; Skogerbø, G.; Li, T.; Aftab, N.; Chen, R. (September 2007). "Systematic identification of non-coding RNA 2,2,7-trimethylguanosine cap structures in Caenorhabditis elegans". BMC Molecular Biology. 8: 86. doi:10.1186/1471-2199-8-86. PMC 2200864. PMID 17903271.

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Caenorhabditis elegans small RNAs

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Small RNAs (sRNAs) have been identified within the C. elegans genome and comparative genomics has shown that they are conserved across several nematode...

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Caenorhabditis elegans

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(rod-like) and Latin elegans (elegant). In 1900, Maupas initially named it Rhabditides elegans. Osche placed it in the subgenus Caenorhabditis in 1952, and in...

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Small interfering RNA

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expression in the nematode, Caenorhabditis elegans. They won the Nobel prize for their research with RNAi in 2006. siRNAs and their role in post-transcriptional...

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History of research on Caenorhabditis elegans

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The nematode worm Caenorhabditis elegans was first studied in the laboratory by Victor Nigon and Ellsworth Dougherty in the 1940s, but came to prominence...

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MicroRNA

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Lee RC, Ambros V (October 2001). "An extensive class of small RNAs in Caenorhabditis elegans". Science. 294 (5543): 862–4. Bibcode:2001Sci...294..862L...

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RNA interference

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Physiology or Medicine for their work on RNAi in the nematode worm Caenorhabditis elegans, which they published in 1998. Since the discovery of RNAi and its...

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MicroRNA sequencing

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C. elegans which identified 18 novel miRNA genes as well as a new class of nematode small RNAs termed 21U-RNAs. Another study comparing small RNA profiles...

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RNA silencing

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RNA silencing or RNA interference refers to a family of gene silencing effects by which gene expression is negatively regulated by non-coding RNAs such...

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U6 spliceosomal RNA

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Zucker-Aprison E, Blumenthal T (May 1990). "The spliceosomal snRNAs of Caenorhabditis elegans". Nucleic Acids Research. 18 (9): 2633–42. doi:10.1093/nar/18...

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Gene knockdown

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"Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans". Nature. 391 (6669): 806–11. Bibcode:1998Natur.391..806F. doi:10...

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U5 spliceosomal RNA

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Zucker-Aprison E, Blumenthal T (May 1990). "The spliceosomal snRNAs of Caenorhabditis elegans". Nucleic Acids Research. 18 (9): 2633–42. doi:10.1093/nar/18...

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Bacillus subtilis BSR sRNAs

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toxin mRNA translation. Bacterial small RNA Mycobacterium tuberculosis sRNA Caenorhabditis elegans small RNAs Escherichia coli sRNA Pseudomonas sRNA TxpA-RatA...

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"Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. Elegans developmental timing". Cell. 106...

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SbRNA

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sbRNA (stem-bulge RNA) is a family of non-coding RNA first discovered in Caenorhabditis elegans. It was identified during a full transcriptome screen...

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Nematode

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The nematode Caenorhabditis elegans is often used as a model organism for studying aging at the molecular level. For example, in C. elegans aging negatively...

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Caenorhabditis briggsae is a small nematode, closely related to Caenorhabditis elegans. The differences between the two species are subtle. The male tail...

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Neuroanatomy

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especially large ganglion at the front, called the brain. The nematode Caenorhabditis elegans has been studied because of its importance in genetics. In the early...

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Y RNA

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separable functions of Y RNAs. Although Y RNA-derived small RNAs are similar in size to microRNAs, it has been shown that these Y RNA fragments are not involved...

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Escherichia coli sRNA

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of small RNAs located in intergenic regions of its genome. The presence of at least 55 of these has been verified experimentally. 275 potential sRNA-encoding...

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Mirtron

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melanogaster and Caenorhabditis elegans. The number of mirtrons identified to date are 14, 9, and 19 in D. melanogaster, C. elegans and mammals respectively...

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Orsay virus

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Orsay virus is a positive-sense single-stranded RNA virus that infects Caenorhabditis elegans nematode. It resembles nodaviruses (family Nodaviridae)...

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Victor Ambros

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Ruvkun, G. (2000). "The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans". Nature. 403 (6772): 901–906. Bibcode:2000Natur...

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