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Affymetrix information


Affymetrix, Inc.
Company typeSubsidiary
IndustryBiotechnology
Founded1992
HeadquartersSanta Clara, California, U.S.
Number of locations
11
Key people
Stephen Fodor, Frank Witney (CEO)
RevenueIncrease US$327 Million (FY 2009)[1]
Operating income
Decrease US$-30.6 Million (FY 2009)[1]
Net income
Decrease US$-23.9 Million (FY 2009)[1]
Total assetsDecrease US$612 Million (FY 2009)[2]
Total equityDecrease US$288 Million (FY 2009)[2]
Number of employees
1,141[3]
ParentThermo Fisher Scientific
Websitehttps://www.thermofisher.com/us/en/home/life-science/microarray-analysis.html

Affymetrix is now Applied Biosystems, a brand of DNA microarray products sold by Thermo Fisher Scientific that originated with an American biotechnology research and development and manufacturing company of the same name.[4] The Santa Clara, California-based Affymetrix, Inc. now a part of Thermo Fisher Scientific was co-founded by Alex Zaffaroni and Stephen Fodor. Stephen Fodor and his group, based on their earlier development of methods to fabricate DNA microarrays using semiconductor manufacturing techniques.[5][6]

In 1994, the company's first product under the "GeneChip" Affymetrix trademark, an HIV genotyping chip was introduced,[7] and the company went public in 1996.[8]

After incorporation, Affymetrix grew in part by acquiring technologies from other companies, including Genetic MicroSystems (slide-based Microarrays and scanners)[citation needed] and Neomorphic (for bioinformatics) in 2000,[9] ParAllele Bioscience (custom SNP genotyping),[citation needed] USB/Anatrace (biochemical reagents) in 2008,[10] Panomics (low to mid-plex applications) in 2008,[citation needed] and eBioscience (flow cytometry) in 2012.[11] Affymetrix spun off Perlegen Sciences,[12][when?] as a discrete business focusing on wafer-scale genomics to characterize population-variance of genomic markers.[13]

In January 2014, the Food and Drug Administration approved Affymetrix's postnatal blood test, CytoScan Dx Assay, looking at whole-genome correlates of congenital abnormalities and other causes of childhood developmental delay.[14]

On January 8, 2016, Thermo Fisher Scientific announced its acquisition of Affymetrix for approximately $1.3 billion,[15] which closed on March 31, 2016.[16]

  1. ^ a b c Affymetrix (AFFX) annual SEC income statement filing via Wikinvest
  2. ^ a b Affymetrix (AFFX) annual SEC balance sheet filing via Wikinvest
  3. ^ "Company Profile for Affymetrix Inc (AFFX)". Archived from the original on 2012-03-01. Retrieved 2008-10-20.
  4. ^ "Thermo Fisher Scientific to acquire Affymetrix". Grainews. Retrieved 2022-03-23.
  5. ^ "Affymetrix and Illumina Settle Their Patent Disputes". fiercebiotech.com. 10 January 2008. Retrieved 2022-01-12.
  6. ^ "Stephen Fodor, Jami Nachtsheim". genomeweb.com. 30 January 2015. Retrieved 2022-01-12.
  7. ^ "Affymetrix and bioMérieux Extend Their Agreement on GeneChip® Technology to Breast Cancer Diagnostics". biomerieux.com. Retrieved 2022-01-12.
  8. ^ "AFFX Meaning AFFX Stock Meaning". acronym.io. Retrieved 2022-01-12.
  9. ^ "Affymetrix to Acquire Neomorphic In a Deal Valued at $70 Million". Wall Street Journal. 2 October 2000. Retrieved 2022-01-14.
  10. ^ "Affymetrix Sells Anatrace Unit to Investment Firm StoneCalibre". genomeweb.com. 15 October 2013. Retrieved 2022-01-28.
  11. ^ "Affymetrix Completes eBioscience Acquisition". genomeweb.com. 26 June 2012. Retrieved 2022-02-02.
  12. ^ "Perlegen Signs Its First Big Pharma Deal with GlaxoSmithKline, Finishes Fifty Genomes". genomeweb.com. 27 September 2002. Retrieved 2022-02-02.
  13. ^ "A Guide to HIV-1 Reverse Transcriptase and Protease Sequencing for Drug Resistance Studies" (PDF). hivdb.stanford.edu. Retrieved 2022-02-09.
  14. ^ "FDA OKs Postnatal Blood Test for Intellectual Disabilities". medscape.com. Retrieved 2022-02-09.
  15. ^ Armental, Maria (8 January 2016). "Thermo Fisher Scientific to Buy Affymetrix in $1.3 Billion Cash Deal". The Wall Street Journal. Retrieved 14 January 2016.
  16. ^ "Thermo Fisher Scientific Completes Acquisition of Affymetrix Following Approval of Transaction by Affymetrix Stockholders". ir.thermofisher.com.

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Affymetrix

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Affymetrix is now Applied Biosystems, a brand of DNA microarray products sold by Thermo Fisher Scientific that originated with an American biotechnology...

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Thermo Fisher Scientific

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providers, including Life Technologies Corporation (2013), Alfa Aesar (2015), Affymetrix (2016), FEI Company (2016), BD Advanced Bioprocessing (2018), and PPD...

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SNP array

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DNA copy number profile for the T47D breast cancer cell line (Affymetrix SNP Array)...

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USB Corporation

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protein studies and RNA analysis. USB was acquired by Affymetrix at the start of 2008. "Affymetrix Completes Acquisition Of USB Corporation". www.pharmaceuticalonline...

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DNA microarray

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probes such as the Agilent design) or shorter (25-mer probes produced by Affymetrix) depending on the desired purpose; longer probes are more specific to...

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Molecular diagnostics

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than a million of different probes can be synthesized on an array with Affymetrix's Genechip technology with a detection limit of one to ten copies of mRNA...

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Bioconductor

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Bioconductor software packages focused on the analysis of single channel Affymetrix and two or more channel cDNA/Oligo microarrays. As the project has matured...

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Microarray

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at Stanford University. With the establishment of companies, such as Affymetrix, Agilent, Applied Microarrays, Arrayjet, Illumina, and others, the technology...

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Stephen Fodor

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businessman in the field of DNA microarray technology. He is the co-founder of Affymetrix, a company that produces DNA microarrays to screen gene expression and...

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Linda Avey

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Washington, D.C." She has stated that she worked for Perlegen Sciences and for Affymetrix[when?] "develop[ing] translational research collaborations with academic...

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Gene expression

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bacterial expression compendia. Many Microbe Microarrays Database: microbial Affymetrix data AlloMap molecular expression testing Bookmarking EPIC-Seq Expressed...

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Factor analysis

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high-density oligonucleotide DNA microarrays data at probe level for Affymetrix GeneChips. In this case, the latent variable corresponds to the RNA concentration...

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R package

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includes object-oriented data-handling and analysis tools for data from Affymetrix, cDNA microarray, and next-generation high-throughput sequencing methods...

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Pelargonic acid

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diet-associated medium chain fatty acids". Neuropharmacology. 69: 105–114. doi:10.1016/j.neuropharm.2012.11.004. PMC 3625124. PMID 23177536. MSDS at affymetrix.com...

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Chip description file

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interrogate exons. Initially, Affymetrix created the specification to describe the layout for an Affymetrix GeneChip array. Affymetrix still provides "official"...

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Lineagen

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children with childhood development disorders. In 2012, Lineagen and Affymetrix, Inc. announced that the companies have signed an agreement where Lineagen...

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Tag SNP

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Most GWAS use products from the two primary genotyping platforms. The Affymetrix platform prints DNA probes on a glass or silicone chip that hybridize...

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Microarray analysis techniques

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to perform a complete analysis. Most microarray manufacturers, such as Affymetrix and Agilent, provide commercial data analysis software alongside their...

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Integrated Genome Browser

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from DNA microarrays. Integrated Genome Browser was first developed at Affymetrix for their scientists and public sector collaborators to visualize data...

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Transcriptomics technologies

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cost per gene and labour saving. Both spotted oligonucleotide arrays and Affymetrix high-density arrays were the method of choice for transcriptional profiling...

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Alternative splicing

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analysis, arrays of DNA fragments representing individual exons (e.g. Affymetrix exon microarray) or exon/exon boundaries (e.g. arrays from ExonHit or...

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Sepp Hochreiter

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Clevert, D.-A.; Obermayer, K. (2006). "A new summarization method for affymetrix probe level data". Bioinformatics. 22 (8): 943–949. doi:10.1093/bioinformatics/btl033...

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Gene expression profiling

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comparison of statistical tests for detecting differential expression using Affymetrix oligonucleotide microarrays". OMICS. 10 (4): 555–66. doi:10.1089/omi.2006...

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Family Tree DNA

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Affymetrix microarray chip, but FamilyTreeDNA changed to the Illumina OmniExpress chip and retested all customers who had results from the Affymetrix...

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GCOS

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GCOS may refer to: Affymetrix GeneChip Operating Software Global Climate Observing System General Comprehensive Operating System, a family of operating...

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Alejandro Zaffaroni

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co-founded Affymetrix, specializing in using genetics for developing new medicine. He was also involved in the creation of Perlegen Sciences, an Affymetrix spin-off...

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Quantile normalization

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Bioinformatics. 19 (2): 185–193. doi:10.1093/bioinformatics/19.2.185. PMID 12538238. Normalization of Affymetrix Chips Archived 2016-04-23 at the Wayback Machine...

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