In molecular biology, SNP array is a type of DNA microarray which is used to detect polymorphisms within a population. A single nucleotide polymorphism (SNP), a variation at a single site in DNA, is the most frequent type of variation in the genome. Around 335 million SNPs have been identified in the human genome,[1] 15 million of which are present at frequencies of 1% or higher across different populations worldwide.[2]
^"dbSNP Summary". www.ncbi.nlm.nih.gov. Retrieved 4 October 2017.
^The 1000 Genomes Project Consortium (2010). "A map of human genome variation from population-scale sequencing". Nature. 467 (7319): 1061–1073. Bibcode:2010Natur.467.1061T. doi:10.1038/nature09534. ISSN 0028-0836. PMC 3042601. PMID 20981092.{{cite journal}}: CS1 maint: numeric names: authors list (link)
biology, SNParray is a type of DNA microarray which is used to detect polymorphisms within a population. A single nucleotide polymorphism (SNP), a variation...
bankruptcy in New Jersey. CombiMatrix uses the CombiSNPArray as their technology platform. SNP stands for Single nucleotide polymorphism probes. These...
disrupted DNA have emerged, such as array comparative genomic hybridization (arrayCGH) and SNParrays. Conceptually, the arrays are composed of hundreds to millions...
was invented by Patrick O. Brown. An example of its application is in SNPsarrays for polymorphisms in cardiovascular diseases, cancer, pathogens and GWAS...
LOH. Copy-neutral LOH cannot be detected by arrayCGH, FISH, or conventional cytogenetics. SNP-based arrays are preferred for virtual karyotyping of tumors...
CaSNP is database for storing data about copy number alterations from SNParrays for different types of cancer. Cao, Qingyi; Zhou Meng; Wang Xujun; Meyer...
oligonucleotide SNParrays, hundreds of thousands of probes are arrayed on a small chip, allowing for many SNPs to be interrogated simultaneously. Because SNP alleles...
linkage maps. An SNParray was developed by Song et al., 2013 and has been used for research and breeding; the same team applied their array in Song et al...
months for stage-3 disease. The median age at diagnosis is 69 years. SNParray karyotyping can detect copy number alterations of prognostic significance...
hybridization and with high-resolution array-based tests based on array comparative genomic hybridization (or aCGH), SNParray technologies and high resolution...
results stored in the participant's record; the project may also use SNParray and genomic sequencing methods. Specific genetic data, linked to the individual...
analyzed with traditional population genetic analyses (microsatellites, SNP-array genotyping, BayeScan (which uses the Dirichlet-multinomial distribution))...
the RosBREED program for Rosaceae in America. They adapted Axiom's 90k SNParray to a more economical 35k for genomic selection in the program. Molecular...
"Illumina, DeCode Build 1M SNP Chip; Q2 Launch to Coincide with Release of Affy's 6.0 SNPArray | BioArray News | Arrays". GenomeWeb. Archived from the...
For molecular breeding (or other purposes) an SNParray has been created by Bekele et al., 2013, a 3K SNP Infinium from Illumina, Inc. Agrobacterium transformation...
homozygous deletion in one sample that was below the resolution of the SNParray. SNParray karyotyping can be used to distinguish, for example, a medulloblastoma...
higher values of the phenotype y Data from Oligo or cDNA arrays, SNParray, protein arrays, etc. can be utilized in SAM Correlates expression data to...
Chantot-Bastaraud, Sandra; et al. (2017). "Formation of upd(7)mat by trisomic rescue: SNParray typing provides new insights in chromosomal nondisjunction". Molecular...
Other techniques are meant to assess a large number of SNPs across the genome, such as SNParrays. This type of technology is commonly used for genome-wide...
long-read WGS analysis of 222 individuals. SNParray Genotyping. The project designed ethnic-specific SNParrays optimized for the Japanese population and...
sequence all SNPs. That is why GWAS use customizable arrays (SNP chips) to genotype only a subset of the variants identified as tag snps. Most GWAS use...
present in a tiny number of individuals; by contrast, techniques such as SNParrays can only detect shared genetic variants that are common to many individuals...
fresh or paraffin-embedded tumors to assess copy number at these loci. SNParray virtual karyotyping is preferred for tumor samples, including neuroblastomas...
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