In molecular biology, Xanthomonas sRNA are small RNAs which have been identified in various species of the bacterium Xanthomonas.
Analysis of the plant pathogen Xanthomonas campestris pv. vesicatoria revealed expression of seven cis-encoded antisense RNAs (asX1-asX7) and 15 intergenic sRNAs (sX1 - sX15). Several sRNAs have also been identified in Xanthomonas campestris pathovar campestris. Some of these X. campestris sRNAs are only found in Xanthomonas, some are also expressed in other bacteria.[1][2] Several of these sRNAs appear to contribute to virulence, including sX12, sX13 and sRNA-Xcc1.[1][3][4]
Computational analysis predicts 63 sRNAs in Xanthomonas oryzae pathovar oryzae, expression of 8 of these has been experimentally confirmed. Expression of three of these is Hfq-dependent.[5]
^ abSchmidtke C, Findeiß S, Sharma CM, Kuhfuß J, Hoffmann S, Vogel J, et al. (2011). "Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions". Nucleic Acids Res. 40 (5): 2020–31. doi:10.1093/nar/gkr904. PMC 3300014. PMID 22080557.
^Jiang RP, Tang DJ, Chen XL, He YQ, Feng JX, Jiang BL, et al. (2010). "Identification of four novel small non-coding RNAs from Xanthomonas campestris pathovar campestris". BMC Genomics. 11: 316. doi:10.1186/1471-2164-11-316. PMC 2996969. PMID 20482898.
^Chen XL, Tang DJ, Jiang RP, He YQ, Jiang BL, Lu GT, et al. (2011). "sRNA-Xcc1, an integron-encoded transposon- and plasmid-transferred trans-acting sRNA, is under the positive control of the key virulence regulators HrpG and HrpX of Xanthomonas campestris pathovar campestris". RNA Biol. 8 (6): 947–953. doi:10.4161/rna.8.6.16690. PMC 3256417. PMID 21941121.
^Schmidtke, C; Abendroth, U; Brock, J; Serrania, J; Becker, A; Bonas, U (Sep 2013). "Small RNA sX13: A Multifaceted Regulator of Virulence in the Plant Pathogen Xanthomonas". PLOS Pathogens. 9 (9): e1003626. doi:10.1371/journal.ppat.1003626. PMC 3771888. PMID 24068933.
^Liang H, Zhao YT, Zhang JQ, Wang XJ, Fang RX, Jia YT (2011). "Identification and functional characterization of small non-coding RNAs in Xanthomonas oryzae pathovar oryzae". BMC Genomics. 12: 87. doi:10.1186/1471-2164-12-87. PMC 3039613. PMID 21276262.
In molecular biology, XanthomonassRNA are small RNAs which have been identified in various species of the bacterium Xanthomonas. Analysis of the plant...
binding sites remained resistant to Xanthomonas oryzae pv. oryzae, but still provided normal development function. RNA silencing-based resistance is a powerful...
the PtaRNA1 is located anti-sense to a short protein-coding gene. In Xanthomonas campestris pv. vesicatoria, this gene is annotated as XCV2162 and is...
rpfG RNA motif is a conserved RNA structure that was discovered by bioinformatics. The rpfG RNA motif is found in the genus Xanthomonas. rpfG RNAs are...
appears dedicated for eukaryotic targeting. The T6SS of plant pathogen Xanthomonas citri protects it from predatory amoeba Dictyostelium discoideum. A wide...
can also be phytopathogenic unlike closely related genera Xylella and Xanthomonas. Members of the genus Stenotrophomonas have an important ecological role...
the most tolerant. The primary foliar disease in oakleaf hydrangea is Xanthomonas leaf spot, which is a bacterial disease. Management techniques to decrease...
the transcription-activator like effectors (TAL effectors) secreted by Xanthomonas bacteria. When injected into plants, these proteins can enter the nucleus...
eukaryotic host. More recently, it has been shown that the phytopathogen Xanthomonas citri utilizes its T4SS to secrete effectors that are lethal to other...
protein, conferring resistance to the Gram-negative bacterial pathogen Xanthomonas oryzae pv. oryzae. Since that time two other plants PRRs, Arabidopsis...
S (2013-07-15). "An improved method for TAL effectors DNA-binding sites prediction reveals functional convergence in TAL repertoires of Xanthomonas oryzae...
heterotrophs, and lithotrophs. As heterotrophs (examples Pseudomonas and Xanthomonas) these bacteria are effective in breaking down organic matter, contributing...
for specific RNA sequence and cleaves at a non-base-paired region (RNA bulge) of the targeted RNA formed when the enzyme binds the RNA. This enzyme shows...
diseases, such as those caused by the fungus Coniothyrium and the bacteria Xanthomonas The case in New Zealand is the only reported case of P. viridiflava infecting...
horizontal gene transfer at a lipopolysaccharide (lps) biosynthetic locus in Xanthomonas oryzae pv. oryzae, the bacterial leaf blight pathogen of rice". BMC Microbiology...
efficient TAL-based gene editing tools. TALE, proteins secreted by the Xanthomonas plant pathogen, bind with great specificity to genes within the plant...
(Jul 2000). "Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence". Int J Syst Evol Microbiol. 50 (4): 1563–89. doi:10.1099/00207713-50-4-1563...
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