Global Information Lookup Global Information

Sanger sequencing information


Sanger sequencing is a method of DNA sequencing that involves electrophoresis and is based on the random incorporation of chain-terminating dideoxynucleotides by DNA polymerase during in vitro DNA replication. After first being developed by Frederick Sanger and colleagues in 1977, it became the most widely used sequencing method for approximately 40 years. It was first commercialized by Applied Biosystems in 1986. More recently, higher volume Sanger sequencing has been replaced by next generation sequencing methods, especially for large-scale, automated genome analyses. However, the Sanger method remains in wide use for smaller-scale projects and for validation of deep sequencing results. It still has the advantage over short-read sequencing technologies (like Illumina) in that it can produce DNA sequence reads of > 500 nucleotides and maintains a very low error rate with accuracies around 99.99%.[1] Sanger sequencing is still actively being used in efforts for public health initiatives such as sequencing the spike protein from SARS-CoV-2[2] as well as for the surveillance of norovirus outbreaks through the Center for Disease Control and Prevention's (CDC) CaliciNet surveillance network.[3]

The Sanger (chain-termination) method for DNA sequencing.
  1. ^ Shendure J, Ji H (October 2008). "Next-generation DNA sequencing". Nature Biotechnology. 26 (10): 1135–1145. doi:10.1038/nbt1486. PMID 18846087. S2CID 6384349.
  2. ^ Daniels RS, Harvey R, Ermetal B, Xiang Z, Galiano M, Adams L, McCauley JW (November 2021). "A Sanger sequencing protocol for SARS-CoV-2 S-gene". Influenza and Other Respiratory Viruses. 15 (6): 707–710. doi:10.1111/irv.12892. PMC 8447197. PMID 34346163.
  3. ^ Vega E, Barclay L, Gregoricus N, Williams K, Lee D, Vinjé J (August 2011). "Novel surveillance network for norovirus gastroenteritis outbreaks, United States". Emerging Infectious Diseases. 17 (8): 1389–1395. doi:10.3201/eid1708.101837. PMC 3381557. PMID 21801614.

and 22 Related for: Sanger sequencing information

Request time (Page generated in 0.8313 seconds.)

Sanger sequencing

Last Update:

Sanger sequencing has been replaced by next generation sequencing methods, especially for large-scale, automated genome analyses. However, the Sanger...

Word Count : 3257

DNA sequencing

Last Update:

comparative ease, the Sanger method was soon automated and was the method used in the first generation of DNA sequencers. Sanger sequencing is the method which...

Word Count : 14413

Sequencing

Last Update:

increasing share of the sequencing market. More genome data are now being produced by pyrosequencing than Sanger DNA sequencing. Pyrosequencing has enabled...

Word Count : 1697

Shotgun sequencing

Last Update:

grouping of a shotgun. The chain-termination method of DNA sequencing ("Sanger sequencing") can only be used for short DNA strands of 100 to 1000 base...

Word Count : 2743

Frederick Sanger

Last Update:

Frederick Sanger was born on 13 August 1918 in Rendcomb, a small village in Gloucestershire, England, the second son of Frederick Sanger, a general practitioner...

Word Count : 5320

Massive parallel sequencing

Last Update:

design is very different from that of Sanger sequencing—also known as capillary sequencing or first-generation sequencing—which is based on electrophoretic...

Word Count : 3019

DNA sequencer

Last Update:

Smith, was introduced by Applied Biosystems in 1987. It used the Sanger sequencing method, a technology which formed the basis of the "first generation"...

Word Count : 3850

Illumina dye sequencing

Last Update:

offers several advantages over traditional sequencing methods such as Sanger sequencing. Sanger sequencing requires two reactions, one for the forward...

Word Count : 1984

Primer walking

Last Update:

technique, also known as "directed sequencing," employs a series of Sanger sequencing reactions to either confirm the reference sequence of a known plasmid...

Word Count : 1168

Dideoxynucleotide

Last Update:

chain-elongating inhibitors of DNA polymerase, used in the Sanger method for DNA sequencing. They are also known as 2',3' because both the 2' and 3' positions...

Word Count : 1180

Genomics

Last Update:

acid sequence of insulin, Frederick Sanger and his colleagues played a key role in the development of DNA sequencing techniques that enabled the establishment...

Word Count : 7518

Frameshift mutation

Last Update:

cloning and sequencing of the suspect gene. The amino acid sequence encoded by the gene is then predicted. NA Sequencing: Sanger sequencing or Next-Generation...

Word Count : 4722

Personalized genomics

Last Update:

methods to conduct DNA sequencing, Whole Exome Sequencing (WES) and Whole Genome Sequencing (WGS). Formal way of sequencing, the sanger technique had some...

Word Count : 2861

Wellcome Sanger Institute

Last Update:

The Wellcome Sanger Institute, previously known as The Sanger Centre and Wellcome Trust Sanger Institute, is a non-profit British genomics and genetics...

Word Count : 3938

Exome sequencing

Last Update:

etc. There are many Next Generation Sequencing sequencing platforms available, postdating classical Sanger sequencing methodologies. Other platforms include...

Word Count : 4675

Human Genome Project

Last Update:

a number of large sequencing centers including those at Whitehead Institute, the Wellcome Sanger Institute (then called The Sanger Centre) based at the...

Word Count : 7206

Alan Coulson

Last Update:

scientist. He is best known for his work on developing DNA sequencing technologies with Frederick Sanger and his contributions to the Caenorhabditis elegans...

Word Count : 474

Whole genome sequencing

Last Update:

genome). The DNA sequencing methods used in the 1970s and 1980s were manual; for example, Maxam–Gilbert sequencing and Sanger sequencing. Several whole...

Word Count : 9463

Exome

Last Update:

advancing the study of genetics, and replacing older methods such as Sanger sequencing. This technology is starting to become more common in healthcare and...

Word Count : 1904

GATC Biotech

Last Update:

third-generation sequencing was based in the headquarters in Constance, Germany. The fully automated NGS laboratories were certified under ISO 17025. The Sanger sequencing...

Word Count : 447

Metagenomics

Last Update:

Biosystems SOLiD system. These techniques for sequencing DNA generate shorter fragments than Sanger sequencing; Ion Torrent PGM System and 454 pyrosequencing...

Word Count : 9198

Targeted analysis sequencing

Last Update:

produce a large amount of data at a fraction of the cost involved in Sanger sequencing. TAS is also useful in DNA studies because it allows for amplification...

Word Count : 202

PDF Search Engine © AllGlobal.net