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C9orf72 information


C9orf72
Identifiers
AliasesC9orf72, chromosome 9 open reading frame 72, ALSFTD, FTDALS, FTDALS1, DENNL72, C9orf72-SMCR8 complex subunit, DENND9
External IDsOMIM: 614260; MGI: 1920455; HomoloGene: 10137; GeneCards: C9orf72; OMA:C9orf72 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_145005
NM_001256054
NM_018325

NM_001081343
NM_028466

RefSeq (protein)

NP_001242983
NP_060795
NP_659442

NP_001074812
NP_082742

Location (UCSC)Chr 9: 27.54 – 27.57 MbChr 4: 35.19 – 35.23 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

C9orf72 (chromosome 9 open reading frame 72) is a protein which in humans is encoded by the gene C9orf72.

The human C9orf72 gene is located on the short (p) arm of chromosome 9 open reading frame 72, from base pair 27,546,546 to base pair 27,573,866 (GRCh38). Its cytogenetic location is at 9p21.2.[5]

The protein is found in many regions of the brain, in the cytoplasm of neurons as well as in presynaptic terminals. Disease-causing mutations in the gene were first discovered by two independent research teams, led by Rosa Rademakers of Mayo Clinic and Bryan Traynor of the National Institutes of Health, and were first reported in October 2011.[6][7] The mutations in C9orf72 are significant because it is the first pathogenic mechanism identified to be a genetic link between familial frontotemporal dementia (FTD) and amyotrophic lateral sclerosis (ALS). It is the most common mutation identified that is associated with familial FTD and/or ALS in Caucasians.[8]

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000147894 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000028300 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ C9orf72 chromosome 9 open reading frame 72 [Homo sapiens] - Gene - NCBI
  6. ^ DeJesus-Hernandez M, Mackenzie IR, Boeve BF, Boxer AL, Baker M, Rutherford NJ, et al. (October 2011). "Expanded GGGGCC hexanucleotide repeat in noncoding region of C9ORF72 causes chromosome 9p-linked FTD and ALS". Neuron. 72 (2): 245–56. doi:10.1016/j.neuron.2011.09.011. PMC 3202986. PMID 21944778.
  7. ^ Renton AE, Majounie E, Waite A, Simón-Sánchez J, Rollinson S, Gibbs JR, et al. (October 2011). "A hexanucleotide repeat expansion in C9ORF72 is the cause of chromosome 9p21-linked ALS-FTD". Neuron. 72 (2): 257–68. doi:10.1016/j.neuron.2011.09.010. PMC 3200438. PMID 21944779.
  8. ^ Babić Leko M, Župunski V, Kirincich J, Smilović D, Hortobágyi T, Hof PR, Šimić G (2019). "C9orf72 Hexanucleotide Repeat Expansion". Behavioural Neurology. 2019: 2909168. doi:10.1155/2019/2909168. PMC 6350563. PMID 30774737.

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C9orf72

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C9orf72 (chromosome 9 open reading frame 72) is a protein which in humans is encoded by the gene C9orf72. The human C9orf72 gene is located on the short...

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ALS

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gene in Europe is C9orf72, followed by SOD1, TARDBP, and FUS, while the most common ALS gene in Asia is SOD1, followed by FUS, C9orf72, and TARDBP. ALS...

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Frontotemporal lobar degeneration

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tau proteins and TAR DNA-binding protein 43 (TDP-43). Mutations in the C9orf72 gene have been established as a major genetic contribution of FTLD, although...

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Frontotemporal dementia

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of 2019[update]) was a hexanucleotide repeat expansion in intron 1 of C9ORF72. Only one or two cases have been reported describing TARDBP (the TDP-43...

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Genetics of amyotrophic lateral sclerosis

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meaning that mutations in two or more genes are required to cause disease. C9orf72 is the most common gene associated with ALS, causing 40% of familial cases...

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Mitochondrion

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Nanda J, et al. (February 2021). "Mitochondrial bioenergetic deficits in C9orf72 amyotrophic lateral sclerosis motor neurons cause dysfunctional axonal...

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Penetrance

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dependent on the age. A specific hexanucleotide repeat expansion within the C9orf72 gene said to be a major cause for developing amyotrophic lateral sclerosis...

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Neurogenetics

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Gene loci Neurological disease APOE ε4, PICALM Alzheimer's disease C9orf72, SOD1 amyotrophic lateral sclerosis HTT Huntington's disease DR15, DQ6 Multiple...

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Spinocerebellar ataxia

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Engelborghs, Sebastiaan; van der Zee, Julie; Van Broeckhoven, Christine (1993). "C9orf72-Related Amyotrophic Lateral Sclerosis and Frontotemporal Dementia". In...

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Neurodegenerative disease

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implicated in some cases of the disease, and a mutation in chromosome 9 (C9orf72) is thought to be the most common known cause of sporadic ALS. Early diagnosis...

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PURA

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expanded repeat of the hexanucleotide GGGGCC at the chromosomal locus C9ORF72. The C9ORF72 hexanucleotide repeat expansion (HRE) is capable of binding Pur-alpha...

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Proteinopathy

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Amyotrophic lateral sclerosis (ALS) Superoxide dismutase, TDP-43, FUS, C9ORF72, ubiquilin-2 (UBQLN2) Huntington's disease and other trinucleotide repeat...

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List of genetic disorders

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SLC25A19 recessive Amyotrophic lateral sclerosis – Frontotemporal dementia C9orf72, SOD1, FUS, TARDBP, CHCHD10, MAPT 1:100,000 Angel-shaped phalango-epiphyseal...

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Rounded shoulder posture

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Nigel M.; Morris, Huw R.; Traynor, Bryan J.; Lynch, Timothy (July 2012). "C9ORF72 expansion in amyotrophic lateral sclerosis/frontotemporal dementia also...

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Amyotrophic lateral sclerosis research

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ALS, and one example is the expressing of C9orf72 mutation that can be introduced in mouse using the BAC C9orf72 gene with the multiple repeats of GGGGCC...

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RAN translation

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translation of expanded hexanucleotide repeats present in an intron of the C9orf72 gene. The expansion of the hexanucleotide repeats and thus accumulation...

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Trinucleotide repeat disorder

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mechanisms involving hybrid RNA:DNA intermediates have been proposed. C9orf72 RAN translation Orr HT, Zoghbi HY (2007). "Trinucleotide repeat disorders"...

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Ben Baldanza

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In 2022, Baldanza was diagnosed with ALS caused by a mutation in the C9orf72 gene. Associated Press (2011-07-12). "Spirit Airlines CEO Ben Baldanza...

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TMEM106B

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for its association to TMEM106B are those with a C90RF72 mutation (FTLD-C9ORF72). Two of the SNPs previously identified as risk factors for FTLD-GRN, rs1990622...

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Project MinE

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genuine Mendelian or monogenic disorder. Autosomal-dominant mutations in the C9orf72 and the SOD1 gene are found in a substantial number of familial ALS cases...

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Stress granule

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PMID 27632217. Maharjan N, Künzli C, Buthey K, Saxena S (May 2017). "C9ORF72 Regulates Stress Granule Formation and Its Deficiency Impairs Stress Granule...

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