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Bacterial artificial chromosome information


A bacterial artificial chromosome (BAC) is a DNA construct, based on a functional fertility plasmid (or F-plasmid), used for transforming and cloning in bacteria, usually E. coli.[1][2][3] F-plasmids play a crucial role because they contain partition genes that promote the even distribution of plasmids after bacterial cell division. The bacterial artificial chromosome's usual insert size is 150–350 kbp.[4] A similar cloning vector called a PAC has also been produced from the DNA of P1 bacteriophage.

BACs were often used to sequence the genomes of organisms in genome projects, for example the Human Genome Project, though they have been replaced by more modern technologies. In BAC sequencing, short piece of the organism's DNA is amplified as an insert in BACs, and then sequenced. Finally, the sequenced parts are rearranged in silico, resulting in the genomic sequence of the organism. BACs were replaced with faster and less laborious sequencing methods like whole genome shotgun sequencing and now more recently next-gen sequencing.

  1. ^ O'Connor M, Peifer M, Bender W (June 1989). "Construction of large DNA segments in Escherichia coli". Science. 244 (4910): 1307–12. Bibcode:1989Sci...244.1307O. doi:10.1126/science.2660262. PMID 2660262.
  2. ^ Shizuya H, Birren B, Kim UJ, Mancino V, Slepak T, Tachiiri Y, Simon M (September 1992). "Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector". Proceedings of the National Academy of Sciences of the United States of America. 89 (18): 8794–7. Bibcode:1992PNAS...89.8794S. doi:10.1073/pnas.89.18.8794. PMC 50007. PMID 1528894.
  3. ^ Shizuya H, Kouros-Mehr H (March 2001). "The development and applications of the bacterial artificial chromosome cloning system" (PDF). The Keio Journal of Medicine. 50 (1): 26–30. doi:10.2302/kjm.50.26. PMID 11296661.
  4. ^ Stone NE, Fan JB, Willour V, Pennacchio LA, Warrington JA, Hu A, de la Chapelle A, Lehesjoki AE, Cox DR, Myers RM (March 1996). "Construction of a 750-kb bacterial clone contig and restriction map in the region of human chromosome 21 containing the progressive myoclonus epilepsy gene". Genome Research. 6 (3): 218–25. doi:10.1101/gr.6.3.218. PMID 8963899.

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Bacterial artificial chromosome

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due to stability issues, YACs were abandoned for the use of bacterial artificial chromosome [2] The bakers' yeast S. cerevisiae is one of the most important...

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Artificial chromosome may refer to: Yeast artificial chromosome Bacterial artificial chromosome Human artificial chromosome P1-derived artificial chromosome...

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viral vectors. Yeast artificial chromosomes and bacterial artificial chromosomes were created before human artificial chromosomes, which were first developed...

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prior to DNA extraction. P1 artificial chromosomes (PACs) have features of both P1 vectors and Bacterial Artificial Chromosomes (BACs). Similar to P1 vectors...

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Cloning vector

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include plasmids, bacteriophages (such as phage λ), cosmids, and bacterial artificial chromosomes (BACs). Some DNA, however, cannot be stably maintained in E...

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Plasmid

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phage with lysogeny genes deleted, cosmids, bacterial artificial chromosomes, or yeast artificial chromosomes are used. Another major use of plasmids is...

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histone-like proteins, which associate with the bacterial chromosome. In archaea, the DNA in chromosomes is even more organized, with the DNA packaged within...

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Recombineering

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and for modifying DNA of any source often contained on a bacterial artificial chromosome (BAC), among other applications. Although developed in bacteria...

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Human Genome Project

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into a type of vector known as "bacterial artificial chromosomes", or BACs, which are derived from bacterial chromosomes which have been genetically engineered...

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Metagenomics

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biological techniques allowed the construction of libraries in bacterial artificial chromosomes (BACs), which provided better vectors for molecular cloning...

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BAC

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the RSTS/E timesharing system for compiled BASIC-PLUS files Bacterial Artificial Chromosome, a DNA construct used for transforming and cloning in bacteria...

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Primer walking

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the gene to be mapped. Libraries of large fragments, mainly bacterial artificial chromosome libraries, are mostly used in genomic projects. To identify...

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Genetic transformation

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particular region of the chromosome may be present in a bacterial cell, as cell division is not precisely matched with chromosome replication. The process...

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Contig

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after initial BAC contig construction. These gaps occur if the Bacterial Artificial Chromosome (BAC) library screened has low complexity, meaning it does...

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Molecular cloning

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thousands to millions of base pairs), then a bacterial artificial chromosome or yeast artificial chromosome vector is often chosen. Specialized applications...

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Chengcang Charles Wu

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genomics, particularly large fragment DNA cloning and BAC (Bacterial Artificial Chromosome) library technologies. Wu is the main contributor of the first...

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Copy number analysis

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high volume of data that come out of an array platform. BAC (Bacterial Artificial Chromosome) arrays were historically the first microarray platform to...

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Fluorescence in situ hybridization

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population maintaining a single artificial chromosome, are stored in various laboratories around the world. The artificial chromosomes (BAC) can be grown, extracted...

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Chromogenic in situ hybridization

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extracted, amplified, sequenced, labelled and mapped from bacterial artificial chromosomes (BACs). BACs were developed during the Human Genome Project...

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Outline of genetics

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animal model antisense apoptosis autosomal dominant autosome bacterial artificial chromosome (BAC) base pair birth defect bone marrow transplantation cancer...

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Smallpox

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(17 September 2002). "Cloning the vaccinia virus genome as a bacterial artificial chromosome in Escherichia coli and recovery of infectious virus in mammalian...

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Reference genome

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either by contigs amplification with PCR and sequencing or by Bacterial Artificial Chromosome (BAC) cloning. Filling these gaps is not always possible, in...

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Copy number variation

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have been reported. Initially these advances involved using bacterial artificial chromosome (BAC) array with around 1 megabase of intervals throughout...

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