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Substrate presentation information


Substrate presentation; A substrate (purple rectangle) is shown sequestered into a lipid domain (green lipids). The substrate's translocation to the disordered region (grey lipids) presents it to its enzyme (blue oval) where it is hydrolyzed.

Substrate presentation is a biological process that activates a protein. The protein is sequestered away from its substrate and then activated by release and exposure of the protein to its substrate.[1][2] A substrate is typically the substance on which an enzyme acts but can also be a protein surface to which a ligand binds. The substrate is the material acted upon. In the case of an interaction with an enzyme, the protein or organic substrate typically changes chemical form. Substrate presentation differs from allosteric regulation in that the enzyme need not change its conformation to begin catalysis. Substrate presentation is best described for domain partitioning at nanoscopic distances (<100 nm).[3]

  1. ^ Petersen, EN; Pavel, MA; Wang, H; Hansen, SB (28 October 2019). "Disruption of palmitate-mediated localization; a shared pathway of force and anesthetic activation of TREK-1 channels". Biochimica et Biophysica Acta (BBA) - Biomembranes. 1862 (1): 183091. doi:10.1016/j.bbamem.2019.183091. PMC 6907892. PMID 31672538.
  2. ^ Robinson, CV; Rohacs, T; Hansen, SB (September 2019). "Tools for Understanding Nanoscale Lipid Regulation of Ion Channels". Trends in Biochemical Sciences. 44 (9): 795–806. doi:10.1016/j.tibs.2019.04.001. PMC 6729126. PMID 31060927.
  3. ^ Yuan, Zixuan; Hansen, Scott B. (20 February 2023). "Cholesterol Regulation of Membrane Proteins Revealed by Two-Color Super-Resolution Imaging". Membranes. 13 (2): 250. doi:10.3390/membranes13020250. PMC 9966874. PMID 36837753.

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Substrate presentation

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Substrate presentation is a biological process that activates a protein. The protein is sequestered away from its substrate and then activated by release...

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Cholesterol

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Cholesterol regulates the biological process of substrate presentation and the enzymes that use substrate presentation as a mechanism of their activation. Phospholipase...

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Enzyme

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catalytic resonance theory. Substrate presentation is a process where the enzyme is sequestered away from its substrate. Enzymes can be sequestered to...

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Palmitoylation

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enzyme trafficks to PIP2 where it encounters its substrate and is active by substrate presentation. Palmitoylation is necessary for the inactivation...

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Allosteric regulation

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physically distinct from its active site. Allostery contrasts with substrate presentation which requires no conformational change for an enzyme's activation...

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Cholesterol signaling

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cholesterol dependent and regulates the proteins' function (e.g., substrate presentation). Cholesterol regulates the function of several membrane proteins...

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Tumor necrosis factor

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results from enzymatic cleavage of mTNF-α, by a process called substrate presentation. mTNF-α is mainly found on monocytes/macrophages where it interacts...

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Amyloid beta

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gamma secretase to yield Aβ in a cholesterol-dependent process and substrate presentation. Aβ molecules can aggregate to form flexible soluble oligomers which...

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Furin

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Furin is a protease, a proteolytic enzyme activated by substrate presentation that in humans and other animals is encoded by the FURIN gene. Some proteins...

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Phospholipase D

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and soluble choline in a cholesterol dependent process called substrate presentation. Plants contain numerous genes that encode various PLD isoenzymes...

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Receptor tyrosine kinase

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expression. The receptors are generally activated by dimerization and substrate presentation. Receptor tyrosine kinases are part of the larger family of protein...

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Activation

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mechanism of reversible bioactivation is substrate presentation where an enzyme translocates near its substrate. Another reversible reaction is where a...

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ADAM17

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protein family of disintegrins and metalloproteases, activated by substrate presentation. ADAM17 is an 824-amino acid polypeptide. ADAM17 is understood to...

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Lipid raft

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protein to its binding partner or substrate in the disordered region, an activation mechanism termed substrate presentation. For example, a protein is often...

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Protein kinase C

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localization also gives the enzyme access to substrate, an activation mechanism termed substrate presentation. The protein kinase C enzymes are known for...

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Power electronic substrate

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archived copy as title (link) (pdf document, last accessed 6/5/06) Quick presentation of several applications and features of the thick film substrates [3]...

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Theories of general anaesthetic action

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from ordered lipid domains allowing the enzyme to be activated by substrate presentation and activate the channel. The second lipid hypothesis states that...

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Poster session

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lamination), satin paper, vinyl, and printable fabric are common substrates for poster presentations. On occasion, poster sessions are displayed digitally on...

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PIP2 domain

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its substrate phosphatidylcholine. Efflux of cholesterol causes PLD2 to translocate to PIP2 domains where it is activated by substrate presentation. Both...

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Palmitate mediated localization

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enzyme away from its substrate. Disruption of palmitate mediated localization then activates the enzyme by substrate presentation.[citation needed] Palmitate...

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PIK3C3

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adaptor protein for the human phosphatidylinositol (PtdIns) 3-kinase. Substrate presentation by phosphatidylinositol transfer protein to the p150.Ptdins 3-kinase...

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