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Sequence logo information


A sequence logo showing the most conserved bases around the initiation codon from all human mRNAs (Kozak consensus sequence). Note that the initiation codon is not drawn to scale, otherwise the letters AUG would each have a height of 2 bits.

In bioinformatics, a sequence logo is a graphical representation of the sequence conservation of nucleotides (in a strand of DNA/RNA) or amino acids (in protein sequences).[1] A sequence logo is created from a collection of aligned sequences and depicts the consensus sequence and diversity of the sequences. Sequence logos are frequently used to depict sequence characteristics such as protein-binding sites in DNA or functional units in proteins.

  1. ^ Schneider TD; Stephens RM (1990). "Sequence Logos: A New Way to Display Consensus Sequences". Nucleic Acids Res. 18 (20): 6097–6100. doi:10.1093/nar/18.20.6097. PMC 332411. PMID 2172928.

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Sequence logo

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A sequence logo is created from a collection of aligned sequences and depicts the consensus sequence and diversity of the sequences. Sequence logos are...

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Consensus sequence

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it as a single consensus sequence e.g. ACNCCA. An alternative method of representing a consensus sequence uses a sequence logo. This is a graphical representation...

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NBC logo

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corporate logos over the course of its history. The first logo was used in 1926 when the radio network began operations. Its most famous logo, the peacock...

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Disney logo

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to accompany the 2006 logo. It was co-arranged and orchestrated by David Metzger. In 2011, starting with The Muppets, the sequence was modified to truncate...

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Kozak consensus sequence

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The Kozak consensus sequence (Kozak consensus or Kozak sequence) is a nucleic acid motif that functions as the protein translation initiation site in...

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Google logo

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Google logo appears in numerous settings to identify the search engine company. Google has used several logos over its history, with the first logo created...

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Biological data visualization

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common techniques in sequence alignment visualization include: Sequence logo: Sequence logos are graphical representations of sequence alignments that display...

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Conserved sequence

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denoting conserved sequence (*), conservative mutations (:), semi-conservative mutations (.), and non-conservative mutations ( ) Sequence logos can also show...

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Sequence motif

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pattern. Observed probabilities can be graphically represented using sequence logos. Sometimes patterns are defined in terms of a probabilistic model such...

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Sequence alignment

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format with a sequence logo in which the size of each nucleotide or amino acid letter corresponds to its degree of conservation. Sequence alignments can...

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Saul Bass

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filmmaker, best known for his design of motion-picture title sequences, film posters, and corporate logos. During his 40-year career, Bass worked for some of Hollywood's...

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Logo of the BBC

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logo of the BBC has been a brand identity for the corporation and its work since the 1950s in a variety of designs. Until the introduction of a logo in...

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Title sequence

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A title sequence (also called an opening sequence or intro) is the method by which films or television programmes present their title and key production...

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List of Top of the Pops presenters

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autumn 1998. A revamp in May 1998 which included a change of title sequence, logo and theme music also saw a shift in focus from the Top 40 to the Top...

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Cleveland Browns

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are unique among the 32 member clubs of the NFL in that they do not have a logo on their helmets. The franchise was founded in 1944 by Brown and businessman...

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Opsin

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phylogeny above, Each clade contains sequences from opsins and other G protein-coupled receptors. The number of sequences and two pie charts are shown next...

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Walt Disney Pictures

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to accompany the 2006 logo. It was co-arranged and orchestrated by David Metzger. In 2011, starting with The Muppets, the sequence was modified to truncate...

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American Broadcasting Company

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small black-and-white "ABC Circle" logo on a yellow background (promotions during this time also featured a sequence of still photos of the stars of its...

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Gongman

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Distributors as one of its cornerstones, the logo was adopted for the whole organisation. The Gongman film logo sequence depicts a man striking a huge gong with...

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Recap sequence

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Deception Desperate Housewives ER (these are preceded by a short stylized logo sequence and followed by the episode's title; however, on the DVD releases and...

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Top of the Pops

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replaced on 2 February 1995, when a new set, title sequence, logo and theme tune were introduced (the logo having first appeared on the new programme Top...

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Gun barrel sequence

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from the Universal Pictures logo where it moves offscreen to the left before reverting to its traditional dot blinking sequence from left to right. This...

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Third Doctor

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introduction of a new official series logo in 2005, the 1996 logo continued to be used by Big Finish Productions as the logo for all pre-2005 series material...

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