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Secretome information


The secretome is the set of proteins expressed by an organism and secreted into the extracellular space. In humans, this subset of the proteome encompasses 13-20% of all proteins, including cytokines, growth factors, extracellular matrix proteins and regulators, and shed receptors. The secretome of a specific tissue can be measured by mass spectrometry and its analysis constitutes a type of proteomics known as secretomics.

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Secretome

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The secretome is the set of proteins expressed by an organism and secreted into the extracellular space. In humans, this subset of the proteome encompasses...

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Stem cell secretome

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The stem cell secretome (also referred to as the stromal cell secretome) is a collective term for the paracrine soluble factors produced by stem cells...

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Skeletal muscle

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well as lipids, amino acids, metabolites and small RNAs are found in the secretome of skeletal muscles. Skeletal muscles are substantially composed of multinucleated...

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Subcellular localization

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bacterial secretome database. There are also several subcellular location databases with computational predictions, such as the fungal secretome and subcellular...

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Secretomics

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Secretomics is a type of proteomics which involves the analysis of the secretome—all the secreted proteins of a cell, tissue or organism. Secreted proteins...

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Signal peptide

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Agrawal GK, Jwa NS, Lebrun MH, Job D, Rakwal R (February 2010). "Plant secretome: unlocking secrets of the secreted proteins". Proteomics. 10 (4): 799–827...

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Secretory protein

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in the secretome section. Bacterial outer membrane vesicles Exocytosis Host–pathogen interaction Membrane vesicle trafficking Secretion Secretome Secretomics...

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Legionella pneumophila

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only known intracellular pathogen to have a Type II Secretion System (secretome). In Type II Secretion, proteins are first translocated across the inner...

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Cellular senescence

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commonly adopt an immunogenic phenotype consisting of a pro-inflammatory secretome, the up-regulation of immune ligands, a pro-survival response, promiscuous...

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List of omics topics in biology

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Microbiome Sociome Genome Variome Exome ORFeome Transcriptome Proteome Kinome Secretome Chaperome Allergenome Pharmacogenome Regulome Hologenome Interactome Interferome...

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Stable isotope labeling by amino acids in cell culture

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PMID 14615979. Hathout Y (April 2007). "Approaches to the study of the cell secretome". Expert Review of Proteomics. 4 (2): 239–248. doi:10.1586/14789450.4...

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Aquaphilus

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"Aquaphilus dolomiae extract counteracts the effects of cutaneous S. aureus secretome isolated from atopic children on CD4+ T cell activation". Pharmaceutical...

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Cooperia oncophora

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genes are important in the free living and parasitic stages. Excretome/secretome (ES) components essentially consist of proteins and other compounds that...

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Hepatopancreas

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Simpson; Gert Wörheide; Bernard M Degnan (2006). "A rapidly evolving secretome builds and patterns a sea shell". BMC Biology. 4: 40. doi:10.1186/1741-7007-4-40...

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Epigenetics of physical exercise

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amino acids, metabolites and small RNAs are found in the secretome of skeletal muscles. A secretome is secreted by skeletal muscle cells, either locally (in...

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Senotherapy

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senescent cells and agents that inhibit the pro-inflammatory senescent secretome. Senescent cells can be targeted for immune clearance, but an ageing immune...

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Galerina marginata

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enzymes in the ectomycorrhizal fungus Amanita bisporigera, based on the secretome of Trichoderma reesei". Fungal Genetics and Biology. 46 (5): 427–35. doi:10...

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Omics

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across different tissues or conditions. 21. Secretomics: Study of the secretome, the entire set of proteins secreted by a cell, tissue, or organism. 22...

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Mollusc shell

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factors and signalling genes are deeply conserved, but the proteins in the secretome are highly derived and rapidly evolving. engrailed serves to demark the...

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Lustrin A

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K.; Simpson, F.; Wörheide, G.; Degnan, B. (2006). "A rapidly evolving secretome builds and patterns a sea shell". BMC Biology. 4: 40. doi:10.1186/1741-7007-4-40...

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CD36

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Reducing the burden of senescent cells, or reducing their inflammatory secretome through CD36 neutralization, accelerates regeneration in young and old...

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Proteomics

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"Selective enrichment of newly synthesized proteins for quantitative secretome analysis". Nature Biotechnology. 30 (10): 984–990. doi:10.1038/nbt.2356...

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Propionibacterium freudenreichii

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Lars; Auvinen, Petri; Jokitalo, Eija; Piironen, Vieno (2018-05-01). "Secretome profiling of Propionibacterium freudenreichii reveals highly variable...

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Amanita bisporigera

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enzymes in the ectomycorrhizal fungus Amanita bisporigera, based on the secretome of Trichoderma reesei". Fungal Genetics and Biology. 46 (5): 427–435....

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Shoba Ranganathan

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2009). "An integrated transcriptomics and proteomics analysis of the secretome of the helminth pathogen Fasciola hepatica: proteins associated with invasion...

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Helminth protein

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behave similarly to extracellular lipid-binding proteins. The Helminth Secretome Database (HSD) is a repository for helminth proteins predicted using expressed...

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