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SSU rRNA information


Small subunit ribosomal ribonucleic acid (SSU rRNA) is the smaller of the two major RNA components of the ribosome. Associated with a number of ribosomal proteins, the SSU rRNA forms the small subunit of the ribosome. It is encoded by SSU-rDNA.

SSU rRNA
Identifiers
SymbolSSU
RfamCL00111
Other data
PDB structuresPDBe

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SSU rRNA

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ribonucleic acid (SSU rRNA) is the smaller of the two major RNA components of the ribosome. Associated with a number of ribosomal proteins, the SSU rRNA forms the...

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Ribosomal RNA

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23S rRNAs. Likewise, the 5S rRNA contains a 108‐nucleotide insertion in the ribosomes of the halophilic archaeon Halococcus morrhuae. A eukaryotic SSU contains...

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16S ribosomal RNA

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16S ribosomal RNA (or 16S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome (SSU rRNA). It binds to the Shine-Dalgarno sequence...

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18S ribosomal RNA

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18S ribosomal RNA (abbreviated 18S rRNA) is a part of the ribosomal RNA in eukaryotes. It is a component of the Eukaryotic small ribosomal subunit (40S)...

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SSU

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ribosomal RNA, as in the SSU rDNA gene or SSU rRNA product (prokaryotic 16S ribosomal RNA, mitochondrial 12S ribosomal RNA, eukaryotic 18S ribosomal RNA) Synchronization...

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List of RNAs

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for the different types of RNA are listed and explained. List of cis-regulatory RNA elements RNA: Types of RNA Non-coding RNA Gribaldo S, Brochier-Armanet...

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Cyclospora

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reflect evolutionary relationships. Genetic studies of the well-conserved SSU rRNA from various specimens has suggested that parasites in Cyclospora may be...

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Evolution of cells

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Instead of relying a single gene such as the small-subunit ribosomal RNA (SSU rRNA) gene to reconstruct early evolution, or a few genes, scientific effort...

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Glomeromycota

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first mycorrhizal gene to be sequenced was the small-subunit ribosomal RNA (SSU rRNA). This gene is highly conserved and commonly used in phylogenetic studies...

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Ribosome biogenesis

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and inhibit RNA polymerase. This binding causes a reduction in rRNA transcription. A reduced amount of rRNA means that ribosomal proteins (r-proteins) will...

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LSU rRNA

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in all known forms of life. SSU rRNA: the small subunit ribosomal ribonucleic acid. "Escherichia coli 23S ribosomal RNA". 3 February 2015. "Halobacterium...

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Horizontal gene transfer in evolution

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life, the gene sequence encoding the small subunit of ribosomal RNA (SSU rRNA, 16s rRNA) has proven useful, and the tree (as shown in the picture) relies...

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Mesostigmatophyceae

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Mesostigmatophyceae, a new class of streptophyte green algae revealed by SSU rRNA sequence comparisons. Protist 150: 399-417, 9 figs, 2 tables. Leliaert...

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Imasa

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malawimonad taxon to be described. According to phylogenetic analyses based on SSU rRNA genes, it is the sister taxon to the rest of malawimonads, the Gefionella+Malawimonas...

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Euglenid

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ultrastructure. This scheme endured until 1986, with the sequencing of the SSU rRNA gene from Euglena gracilis. Euglenids are currently regarded as a highly...

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FCF1

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rRNA-processing protein FCF1 homolog is a protein that in humans is encoded by the FCF1 gene. GRCh38: Ensembl release 89: ENSG00000119616 – Ensembl, May...

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Euglenophyceae

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plastid-containing euglenophytes based on SSU rDNA sequence comparisons and synapomorphic signatures in the SSU rRNA secondary structure". Protist. 154 (1):...

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Placozoa

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position of Placozoa based on large subunit (LSU) and small subunit (SSU) rRNA genes". Genetics and Molecular Biology. 30 (1): 127–132. doi:10...

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Eutreptiaceae

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plastid-containing euglenophytes based on SSU rDNA sequence comparisons and synapomorphic signatures in the SSU rRNA secondary structure". Protist. 154 (1):...

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Operational taxonomic unit

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Matias; von Mering, Christian (24 April 2014). "Ecological Consistency of SSU rRNA-Based Operational Taxonomic Units at a Global Scale". PLOS Comput Biol...

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Microbial phylogenetics

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common methods to estimate microbial phylogenies. Small subunit (SSU) rRNA (SSU rRNA) have revolutionized microbial classification since the 1970s and...

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Tubulinea

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ISBN 0-697-04759-8. Bolivar, I.; Fahrni, J.F.; Smirnov, A. & Pawlowski, J. (2001). "SSU rRNA-based Phylogenetic Position of the Genera Amoeba and Chaos (Lobosea, Gymnamoebia):...

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Microbial DNA barcoding

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subunit of the ribosomal RNA (SSU rRNA) gene to distinguish between bacteria, archaea and eukaryotes. Out of this approach, the SSU rRNA gene made its way to...

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Chromadorea

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Chromadorea:Rhabditida) with special emphasis on dracunculoid nematodes inferred from SSU rRNA gene sequences". Elsevier. Archived from the original on 2018-03-03. Retrieved...

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Mitochondrial ribosome

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large (mt-LSU) and small (mt-SSU). Mitoribosomes consist of several specific proteins and fewer rRNAs. While mitochondrial rRNAs are encoded in the mitochondrial...

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Dinoflagellate

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Keeling PJ, Cavalier-Smith T (September 2001). "Dinoflagellate nuclear SSU rRNA phylogeny suggests multiple plastid losses and replacements". Journal of...

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Difflugia

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Heger, Thierry J.; Mitchell, Edward A. D.; Lara, Enrique (2012-05-01). "SSU rRNA Phylogeny of Arcellinida (Amoebozoa) Reveals that the Largest Arcellinid...

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Euglena

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plastid-containing euglenophytes based on SSU rDNA sequence comparisons and synapomorphic signatures in the SSU rRNA secondary structure". Protist. 154 (1):...

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