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Microbial DNA barcoding information


Microbial DNA barcoding is the use of DNA metabarcoding to characterize a mixture of microorganisms. DNA metabarcoding is a method of DNA barcoding that uses universal genetic markers to identify DNA of a mixture of organisms.[1]

  1. ^ Elbrecht V, Leese F (8 July 2015). "Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass--Sequence Relationships with an Innovative Metabarcoding Protocol". PLOS ONE. 10 (7): e0130324. Bibcode:2015PLoSO..1030324E. doi:10.1371/journal.pone.0130324. PMC 4496048. PMID 26154168.

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Microbial DNA barcoding

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Microbial DNA barcoding is the use of DNA metabarcoding to characterize a mixture of microorganisms. DNA metabarcoding is a method of DNA barcoding that...

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DNA barcoding

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DNA barcoding is a method of species identification using a short section of DNA from a specific gene or genes. The premise of DNA barcoding is that by...

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Microorganism

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single-celled form or as a colony of cells. The possible existence of unseen microbial life was suspected from ancient times, such as in Jain scriptures from...

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Fish DNA barcoding

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monitoring. DNA barcoding DNA barcoding in diet assessment Algae DNA barcoding Microbial DNA barcoding Aquatic macroinvertebrate DNA barcoding Rees, Helen...

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Environmental DNA

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Reid, Chris A.M; Petitpierre, Eduard; Gómez-Zurita, Jesús (2009). "DNA barcoding insect–host plant associations". Proceedings of the Royal Society B:...

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Microbiome

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critical. Discovery of DNA, the development of sequencing technologies, PCR, and cloning techniques enabled the investigation of microbial communities using...

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Marine microorganisms

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Microbes Marine microbial symbiosis Microbial biogeography Microbial communities Microbial ecology Microbial food web Microbial loop Microbial oxidation of...

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Algae DNA barcoding

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information on DNA barcoding of different organisms can be found here: Microbial DNA barcoding DNA barcoding Fish DNA barcoding DNA barcoding in diet assessment...

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Pollen DNA barcoding

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Pollen DNA barcoding is the process of identifying pollen donor plant species through the amplification and sequencing of specific, conserved regions...

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Fungal DNA barcoding

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were observed. DNA barcoding Microbial DNA barcoding Pollen DNA barcoding DNA barcoding in diet assessment Consortium for the Barcode of Life Irinyi L...

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Microbiota

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Metagenomics is also used extensively for studying microbial communities. In metagenomic sequencing, DNA is recovered directly from environmental samples...

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Hydrothermal vent microbial communities

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The hydrothermal vent microbial community includes all unicellular organisms that live and reproduce in a chemically distinct area around hydrothermal...

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DNA sequencing

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including the human genome and other complete DNA sequences of many animal, plant, and microbial species. The first DNA sequences were obtained in the early 1970s...

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Metabarcoding

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Metabarcoding is the barcoding of DNA/RNA (or eDNA/eRNA) in a manner that allows for the simultaneous identification of many taxa within the same sample...

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Microalgae

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Synthetic microbial consortia Techniques Dark-field microscopy DNA sequencing Impedance microbiology Microbial cytology Microbial DNA barcoding Microbiological...

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Metagenomics

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powerful way of understanding the microbial world that might revolutionize understanding of biology. As the price of DNA sequencing continues to fall, metagenomics...

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Marine prokaryotes

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Flagellum Nucleoid    region Chromosome       (DNA) Ribosome Cell membrane Cell wall Capsule Pili Marine prokaryotes are marine bacteria and marine archaea...

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Marine food web

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primers chosen for the previous DNA amplification. Microbial DNA barcoding Algae DNA barcoding Fish DNA barcoding DNA barcoding in diet assessment Kelp forests...

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Marine viruses

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(a long molecule that carries genetic information in the form of either DNA or RNA) surrounded by a capsid (a protein coat protecting the genetic material)...

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Aquatic macroinvertebrate DNA barcoding

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DNA barcoding is an alternative method to the traditional morphological taxonomic classification, and has frequently been used to identify species of...

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Species

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1038/s41467-021-24129-1. PMC 8263725. PMID 34234115. "What Is DNA Barcoding?". Barcode of Life. Archived from the original on 1 July 2017. Retrieved 11...

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DNA barcoding in diet assessment

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the field. Fish DNA barcoding Aquatic macroinvertebrates DNA barcoding Microbial DNA barcoding Algae DNA barcoding Pollen DNA barcoding King RA, Read DS...

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Internal transcribed spacer

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the most widely sequenced DNA region in molecular ecology of fungi and has been recommended as the universal fungal barcode sequence. It has typically...

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Molecular phylogenetics

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is in DNA barcoding, wherein the species of an individual organism is identified using small sections of mitochondrial DNA or chloroplast DNA. Another...

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Optical mapping

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large-scale sequencing projects for both microbial and eukaryotic genomes. Later technologies use DNA melting, DNA competitive binding or enzymatic labelling...

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Operational taxonomic unit

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taxonomy or modern evolutionary taxonomy. OTUs are employed in microbial community DNA sequencing research to delineate species-level distinctions among...

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Marine protists

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environmental DNA or RNA has transformed understanding of microbial diversity  and evolution, as well as generating hypotheses on microbial interactions...

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Marine microbial symbiosis

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Microbial symbiosis in marine animals was not discovered until 1981. In the time following, symbiotic relationships between marine invertebrates and chemoautotrophic...

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Protist

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these predictions are highly subjective. Molecular techniques such as DNA barcoding are being used to compensate for the lack of morphological diagnoses...

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