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Prokaryotic mRNA degradation information


Prokaryotic messenger RNA (mRNA) degradation, also called prokaryotic mRNA decay,[1] is an important part of gene regulation in prokaryotes..[2] In this process, specific proteins target and break down mRNA. These proteins break down certain sections of the mRNA, such as 5’ ends and specific base pairs.[2] This degradation happens in response to different environmental cues, allowing the organism to stop expressing certain genes in order to survive. This also occurs during and after translation, in order to reuse the material that was used to create the RNA. This process can vary, depending on the organism and the situation.[2]

mRNA degradation targets specific sequences of messenger RNA, allowing some to stay in the cell for longer than others—and even genes within the same strand of RNA can be degraded at different rates. This is true in both prokaryotes and eukaryotes. Because of this, mRNA degradation plays a key role in determining which genes are expressed. Also, this process gives organisms greater evolutionary fitness, as it means they do not have to expend energy to find new resources.[2]

  1. ^ Kushner, Sidney R. (October 2004). "mRNA Decay in Prokaryotes and Eukaryotes: Different Approaches to a Similar Problem". IUBMB Life. 56 (10): 585–594. doi:10.1080/15216540400022441. PMID 15814456.
  2. ^ a b c d Hui, Monica P.; Foley, Patricia L.; Belasco, Joel G. (2014). "Messenger RNA Degradation in Bacterial Cells". Annual Review of Genetics. 48: 537–559. doi:10.1146/annurev-genet-120213-092340. PMC 4431577. PMID 25292357.

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Prokaryotic mRNA degradation

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Prokaryotic messenger RNA (mRNA) degradation, also called prokaryotic mRNA decay, is an important part of gene regulation in prokaryotes.. In this process...

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Messenger RNA

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translation. mRNA can also be polyadenylated in prokaryotic organisms, where poly(A) tails act to facilitate, rather than impede, exonucleolytic degradation.[citation...

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Polyadenylation

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tail is added to an RNA at the end of transcription. On mRNAs, the poly(A) tail protects the mRNA molecule from enzymatic degradation in the cytoplasm and...

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Ribosomal RNA

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eukaryotic and prokaryotic rRNA degradation, leading researchers to believe that the two degrade using different pathways. Certain mutations in rRNA that were...

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Primary transcript

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transcripts designated to be mRNAs are modified in preparation for translation. For example, a precursor mRNA (pre-mRNA) is a type of primary transcript...

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RNA interference

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acid (RNA) molecules, microRNA (miRNA) and small interfering RNA (siRNA), are central to components to the RNAi pathway. Once mRNA is degraded, post-transcriptional...

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RNA

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protein form with the help of tRNA. In prokaryotic cells, which do not have nucleus and cytoplasm compartments, mRNA can bind to ribosomes while it is...

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RNA integrity number

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determining the quality of RNA to be analyzed. A major criticism to RIN is when using with plants or in studies of eukaryotic-prokaryotic cells interactions....

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Gene expression

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which protects the RNA from degradation. The poly(A) tail is bound by multiple poly(A)-binding proteins (PABPs) necessary for mRNA export and translation...

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Baltimore classification

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viruses based on their manner of messenger RNA (mRNA) synthesis. By organizing viruses based on their manner of mRNA production, it is possible to study viruses...

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CRISPR

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palindromic repeats) is a family of DNA sequences found in the genomes of prokaryotic organisms such as bacteria and archaea. These sequences are derived from...

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Ribosome biogenesis

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synthesis and processing of the three prokaryotic or four eukaryotic rRNAs, as well as assembly of those rRNAs with the ribosomal proteins. Most of the...

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Regulation of gene expression

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domains Transcription Post-transcriptional modification RNA transport Translation mRNA degradation In eukaryotes, the of large regions of DNA can depend...

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Argonaute

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targeted mRNA can induce mRNA degradation. The Argonaute-miRNA complex can also affect the formation of functional ribosomes at the 5′-end of the mRNA. The...

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Ribosome

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acids in a protein is transcribed into a messenger RNA (mRNA) chain. Ribosomes bind to messenger RNAs and use their sequences[clarification needed] to determine...

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Prokaryotic DNA replication

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Prokaryotic DNA Replication is the process by which a prokaryote duplicates its DNA into another copy that is passed on to daughter cells. Although it...

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Bacteriophage

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to degrade a portion of the cell membrane before inserting their genetic material. Within minutes, bacterial ribosomes start translating viral mRNA into...

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Cell division

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non-nucleated prokaryotic cells and complex nucleated eukaryotic cells. Due to their structural differences, eukaryotic and prokaryotic cells do not divide...

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Archaea

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single-celled organisms. These microorganisms lack cell nuclei and are therefore prokaryotic. Archaea were initially classified as bacteria, receiving the name archaebacteria...

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Gene knockdown

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the degradation of the mRNA transcript (e.g. by small interfering RNA (siRNA)) or RNase-H dependent antisense, or through the blocking of either mRNA translation...

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Gene

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encodes a protein (if it is an mRNA) or forms a 'structural' RNA, such as a transfer RNA (tRNA) or ribosomal RNA (rRNA) molecule. Each region of the DNA...

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Ubiquitin

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Endoplasmic-reticulum-associated protein degradation JUNQ and IPOD Prokaryotic ubiquitin-like protein SUMO enzymes Goldstein G, Scheid M, Hammerling U, Schlesinger...

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