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Nucleolus organizer region information


The location of NORs and the nucleolar cycle in human cells.

Nucleolus organizer regions (NORs) are chromosomal regions crucial for the formation of the nucleolus. In humans, the NORs are located on the short arms of the acrocentric chromosomes 13, 14, 15, 21 and 22, the genes RNR1, RNR2, RNR3, RNR4, and RNR5 respectively.[1] These regions code for 5.8S, 18S, and 28S ribosomal RNA.[1] The NORs are "sandwiched" between the repetitive, heterochromatic DNA sequences of the centromeres and telomeres.[1] The exact sequence of these regions is not included in the human reference genome as of 2016[1] or the GRCh38.p10 released January 6, 2017.[2] On 28 February 2019, GRCh38.p13 was released, which added the NOR sequences for the short arms of chromosomes 13, 14, 15, 21, and 22.[3] However, it is known that NORs contain tandem copies of ribosomal DNA (rDNA) genes.[1] Some sequences of flanking sequences proximal and distal to NORs have been reported.[4] The NORs of a loris have been reported to be highly variable.[5] There are also DNA sequences related to rDNA that are on other chromosomes and may be involved in nucleoli formation.[6]

Silver-stained nucleolus organizer region (arrow) at the tip of a chromosome of the Gecko Lepidodactylus lugubris
  1. ^ a b c d e McStay B (2016). "Nucleolar organizer regions: genomic 'dark matter' requiring illumination". Genes & Development. 30 (14): 1598–610. doi:10.1101/gad.283838.116. PMC 4973289. PMID 27474438.
  2. ^ anon. "Human Genome Overview". ncbi.nlm.nih.gov/. Genome Reference Consortium. Retrieved 17 June 2017.
  3. ^ The Genome Reference Consortium. "GRCh38.p13 has been released". GenomeRef. Retrieved 16 August 2019.
  4. ^ Floutsakou I, Agrawal S, Nguyen TT, Seoighe C, Ganley AR, McStay B (2013). "The shared genomic architecture of human nucleolar organizer regions". Genome Research. 23 (12): 2003–12. doi:10.1101/gr.157941.113. PMC 3847771. PMID 23990606.
  5. ^ Baicharoen S, Hirai Y, Srikulnath K, Kongprom U, Hirai H (2016). "Hypervariability of Nucleolus Organizer Regions in Bengal Slow Lorises, Nycticebus bengalensis (Primates, Lorisidae)". Cytogenetic and Genome Research. 149 (4): 267–273. doi:10.1159/000449145. PMID 27648559.
  6. ^ Kupriyanova NS, Netchvolodov KK, Sadova AA, Cherepanova MD, Ryskov AP (2015). "Non-canonical ribosomal DNA segments in the human genome, and nucleoli functioning". Gene. 572 (2): 237–42. doi:10.1016/j.gene.2015.07.019. PMID 26164756.

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Nucleolus organizer region

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Nucleolus organizer regions (NORs) are chromosomal regions crucial for the formation of the nucleolus. In humans, the NORs are located on the short arms...

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Nucleolus

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nucleolus in immunofluorescence experiments. Although usually only one or two nucleoli can be seen, a diploid human cell has ten nucleolus organizer regions...

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Nor

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noradrenaline Nitrite oxidoreductase, an enzyme Nucleolus organizer region, a chromosomal region around which the nucleolus forms in cell biology Norfolk Orbital...

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Ribosomal RNA

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The genes coding for 18S, 28S and 5.8S rRNA are located in the nucleolus organizer region and are transcribed into large precursor rRNA (pre-rRNA) molecules...

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UBTF

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"ASE-1: a novel protein of the fibrillar centres of the nucleolus and nucleolus organizer region of mitotic chromosomes". Chromosoma. 106 (8): 493–502....

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Sirtuin 7

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(RNA Pol I) and upstream binding factor (UBF). SIRT7 is localized to the nucleolus and interacts with RNA Pol I. Chromatin immunoprecipitation studies demonstrate...

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Barbara McClintock

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the presence of the nucleolus organizer region on a region on maize chromosome 6, which is required for the assembly of the nucleolus. In 1933, she established...

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Mastocytoma in dogs

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detection of cell division markers such as Ki-67 or the argyrophilic nucleolus organizer region (AgNOR) also shows correlations with the biological behavior of...

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CD3EAP

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"ASE-1: a novel protein of the fibrillar centres of the nucleolus and nucleolus organizer region of mitotic chromosomes". Chromosoma. 106 (8): 493–502....

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Cell nucleus

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nucleolar organizer regions (NOR). The main roles of the nucleolus are to synthesize rRNA and assemble ribosomes. The structural cohesion of the nucleolus depends...

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Satellite chromosome

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whose secondary constriction is associated with the formation of the nucleolus are referred to as nucleolar SAT-chromosomes. There are at least 4 SAT-chromosomes...

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Secondary constriction

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constrictions indicate sites of nucleolus formation and are called "nucleolar organizing regions" (NORs). The nucleolus in the nucleus remains associated...

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Ribosomal DNA

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also called nucleolus organizer regions, as they give rise to the nucleolus. In rDNA, the tandem repeats are mostly found in the nucleolus; but heterochromatic...

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RNR1

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Gene: RNR1 RNA, ribosomal 1". Nucleolus organizer regions are chromosomal regions crucial for the formation of the nucleolus, located on the short arms of...

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RNR4

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Gene: RNR4 RNA, ribosomal 4". Nucleolus organizer regions are chromosomal regions crucial for the formation of the nucleolus, located on the short arms of...

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RNR5

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Gene: RNR5 RNA, ribosomal 5". Nucleolus organizer regions are chromosomal regions crucial for the formation of the nucleolus, located on the short arms of...

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RNA polymerase I

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confined to the nucleolus, where about 400 copies of the 42.9-kb rDNA gene are present, arranged as tandem repeats in nucleolus organizer regions. Each...

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Nucleoid

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"Colocalization of distant chromosomal loci in space in E. coli: a bacterial nucleolus". Genes & Development. 30 (20): 2272–2285. doi:10.1101/gad.290312.116...

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RNR3

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ribosomal 3". "Rnr3 | SGD". Nucleolus organizer regions are chromosomal regions crucial for the formation of the nucleolus, located on the short arms of...

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Centromere

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some protein coding genes, human acrocentric p-arms also contain Nucleolus organizer regions (NORs), from which ribosomal RNA is transcribed. However...

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Concerted evolution

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Closely related species or even populations may differ in their nucleolus organizing regions (NORs), which are genomic regions that contain many copies...

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Mitosis

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segregates the DNA from the cytoplasm, disintegrates into small vesicles. The nucleolus, which makes ribosomes in the cell, also disappears. Microtubules project...

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AKAP11

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Cellular component cytoplasm peroxisome cytoskeleton microtubule organizing center nucleolus cytosol plasma membrane Biological process intracellular signal...

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C19orf67

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is expected to be targeted in the nucleus, specifically the nucleolus. The promoter region is predicted to start 1,303 bp upstream from the 5' UTR and...

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NPM1

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B23.1 and B23.2 respectively in rat. The isoform 1 is localized to the nucleolus as is reported for rat B23.1 whereas the isoform 3 (B23.2) is nucleoplasmic...

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Luapeleamoeba

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a thick region of cytoplasm with granules containing a contractile vacuole usually posterior to the single nucleus. There is a big nucleolus with a diameter...

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