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Maturase K information


Maturase K
Identifiers
OrganismArabidopsis thaliana, plants
SymbolmatK
Alt. symbolsycf14
Entrez844797
RefSeq (mRNA)NP_051040.2
UniProtP56784
Search for
StructuresSwiss-model
DomainsInterPro
MatK/TrnK, N-terminal (inactive RT)
Identifiers
SymbolMatK_N
PfamPF01824
InterProIPR024942
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary
Location of the matK gene in the chloroplast genome of Arabidopsis thaliana. matK is one of the protein-coding genes involved in functions other than photosynthetic reactions (red boxes). matK maps at the 2–3.5 kb coordinates.

Maturase K (matK) is a plant plastidial gene.[1] The protein it encodes is an organelle intron maturase, a protein that splices Group II introns. It is essential for in vivo splicing of Group II introns.[2] Amongst other maturases, this protein retains only a well conserved domain X and remnants of a reverse transcriptase domain.[3]

Universal matK primers can be used for DNA barcoding of angiosperms.[4]

  1. ^ Zoschke R, Nakamura M, Liere K, Sugiura M, Börner T, Schmitz-Linneweber C (February 2010). "An organellar maturase associates with multiple group II introns". Proceedings of the National Academy of Sciences of the United States of America. 107 (7): 3245–50. Bibcode:2010PNAS..107.3245Z. doi:10.1073/pnas.0909400107. PMC 2840290. PMID 20133623.
  2. ^ Ahlert D, Piepenburg K, Kudla J, Bock R (July 2006). "Evolutionary origin of a plant mitochondrial group II intron from a reverse transcriptase/maturase-encoding ancestor". Journal of Plant Research. 119 (4): 363–71. Bibcode:2006JPlR..119..363A. doi:10.1007/s10265-006-0284-0. PMID 16763758. S2CID 8277547.
  3. ^ Mohr G, Perlman PS, Lambowitz AM (November 1993). "Evolutionary relationships among group II intron-encoded proteins and identification of a conserved domain that may be related to maturase function". Nucleic Acids Research. 21 (22): 4991–7. doi:10.1093/nar/21.22.4991. PMC 310608. PMID 8255751.
  4. ^ Jing YU, Jian-Hua XU, Shi-Liang ZH (May 2011). "New universal matK primers for DNA barcoding angiosperms". Journal of Systematics and Evolution. 49 (3): 176–81. doi:10.1111/j.1759-6831.2011.00134.x. S2CID 86349548.

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Maturase K

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Maturase K (matK) is a plant plastidial gene. The protein it encodes is an organelle intron maturase, a protein that splices Group II introns. It is essential...

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Kand Mool. Its purity was searched on agarose gel. The plastid locus for maturase k was selected to identify the plant species. The similarity search revealed...

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Galanthus

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internal transcribed spacer), and plastid encoded genes matK (Maturase K), trnL-F, ndhF, and psbK–psbI, and examined all species recognised at the time, as...

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DNA barcoding

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been found in the chloroplast genome, the most promising being maturase K gene (matK) by itself or in association with other genes. Multi-locus markers...

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Loxopterygium

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Online, retrieved 27 August 2021 "Loxopterygium huasango isolate 68 maturase K (matK) gene, partial cds; chloroplast." National Center for Biotechnology...

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Group II intron

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including LtrA, share a reverse transcriptase domain and a "Domain X". Maturase K (MatK) is a protein somewhat similar to those intron-encoded proteins, found...

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MATK

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MATK or Megakaryocyte-associated tyrosine kinase, a human gene matK or Maturase K, a plastid plant gene Matk Cirque, an Alpine glacial valley in Slovenia...

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Catamixis

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not found in any lineage except Pertyoideae. A point mutation in the maturase K gene is shared with the genera Ainsliaea and Pertya, which belong to the...

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Pramod Tandon

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Nymphaeales: ITS2 secondary structure analysis and in silico testing of maturase k (matK) as a potential marker for DNA bar coding". BMC Bioinformatics. 13...

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hydrogenase H-cluster radical SAM maturase (metallocluster assembly) HydG - [FeFe] hydrogenase H-cluster radical SAM maturase (metallocluster assembly) LipA...

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Nitrogen fixation

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evolution as early as around 3.2 Ga. Nitrogenase appears to have evolved from maturase-like proteins, although the function of the preceding protein is currently...

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Group III intron

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Hook FW; Jenkins KP; Hallick RB (1994). "A group III twintron encoding a maturase-like gene excises through lariat intermediates". Nucleic Acids Res. 22...

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Protein moonlighting

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of several moonlighting proteins, such as I-AniI homing endonuclease / maturase and the PutA proline dehydrogenase / transcription factor, have been determined...

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Mitochondrion

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PMID 214710. S2CID 4314378. Hebbar SK, Belcher SM, Perlman PS (April 1992). "A maturase-encoding group IIA intron of yeast mitochondria self-splices in vitro"...

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Unonopsis guatterioides

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protein, sequences available on NCBI. These are sequences of: maturase enzyme gene matK; 2 sequences of the rubisco large subunit gene, rbcL; and a sequence...

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Taxonomy of Protista

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PMC 6212452. PMID 30385814. Galindo LJ, Prokina K, Torruella G, López-García P, Moreira D (April 2023). "Maturases and Group II Introns in the Mitochondrial...

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List of homing endonuclease cutting sites

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two non-adjacent amino acids in the S.cerevisiae bi2 intron-encoded RNA maturase is sufficient to gain a homing-endonuclease activity". EMBO J. 15 (14):...

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Group I catalytic intron

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of group I introns are also found to encode a class of proteins called maturases that facilitate the intron splicing. Intron Group I Intron Sequence and...

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