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Cyclotide information


Cyclotide family
Structure and sequence of the prototypic cyclotide kalata B1
Identifiers
SymbolCyclotide
PfamPF03784
InterProIPR005535
PROSITEPDOC51052
SCOP21kal / SCOPe / SUPFAM
OPM superfamily112
OPM protein1nb1
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

In biochemistry, cyclotides are small, disulfide-rich peptides isolated from plants.[1] Typically containing 28-37 amino acids, they are characterized by their head-to-tail cyclised peptide backbone and the interlocking arrangement of their three disulfide bonds. These combined features have been termed the cyclic cystine knot (CCK) motif. To date, over 100 cyclotides have been isolated and characterized from species of the families Rubiaceae, Violaceae, and Cucurbitaceae. Cyclotides have also been identified in agriculturally important families such as the Fabaceae and Poaceae.[2][3][4]

  1. ^ Craik DJ, Daly NL, Bond T, Waine C (December 1999). "Plant cyclotides: A unique family of cyclic and knotted proteins that defines the cyclic cystine knot structural motif". Journal of Molecular Biology. 294 (5): 1327–36. doi:10.1006/jmbi.1999.3383. PMID 10600388.
  2. ^ Poth AG, Colgrave ML, Lyons RE, Daly NL, Craik DJ (June 2011). "Discovery of an unusual biosynthetic origin for circular proteins in legumes". Proceedings of the National Academy of Sciences of the United States of America. 108 (25): 10127–32. Bibcode:2011PNAS..10810127P. doi:10.1073/pnas.1103660108. PMC 3121837. PMID 21593408.
  3. ^ Nguyen GK, Zhang S, Nguyen NT, Nguyen PQ, Chiu MS, Hardjojo A, Tam JP (July 2011). "Discovery and characterization of novel cyclotides originated from chimeric precursors consisting of albumin-1 chain a and cyclotide domains in the Fabaceae family". The Journal of Biological Chemistry. 286 (27): 24275–87. doi:10.1074/jbc.M111.229922. PMC 3129208. PMID 21596752.
  4. ^ Nguyen GK, Lian Y, Pang EW, Nguyen PQ, Tran TD, Tam JP (February 2013). "Discovery of linear cyclotides in monocot plant Panicum laxum of Poaceae family provides new insights into evolution and distribution of cyclotides in plants". The Journal of Biological Chemistry. 288 (5): 3370–80. doi:10.1074/jbc.M112.415356. PMC 3561556. PMID 23195955.

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Cyclotide

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In biochemistry, cyclotides are small, disulfide-rich peptides isolated from plants. Typically containing 28-37 amino acids, they are characterized by...

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Clitoria ternatea

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and characterization of novel cyclotides originated from chimeric precursors consisting of albumin-1 chain a and cyclotide domains in the Fabaceae family"...

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Inhibitor cystine knot

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the growth factor cystine knot (GFCK) and the cyclic cystine knot (CCK; cyclotide). Types include a) cyclic mobius, b) cyclic bracelet, c) acyclic inhibitor...

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Nasi kerabu

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Jackson; David J. Craik (28 May 2019). "Butterfly Pea (Clitoria ternatea), a Cyclotide-Bearing Plant With Applications in Agriculture and Medicine". Frontiers...

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Viola tricolor

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kaempferol. V. tricolor is one of many viola plant species containing cyclotides. These small peptides have proven to be useful in drug development due...

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Alanine scanning

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individual residues on structure and activity in the prototypic cyclotide kalata B1. Cyclotides display a wide range of pharmaceutically important bioactivities...

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Viola arvensis

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of disturbed and cultivated areas. Viola arvensis was shown to contain cyclotides, a class of peptides found in plants. The peptide cycloviolacin O2 in...

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Viola odorata

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countries.[citation needed] V. oderata contains the alkaloid violin, about 30 cyclotides, and triterpenoids, mostly as constituents of the essential oil.[citation...

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Gloeospermum

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Göransson, Ulf (2010-01-01). "Cyclotide proteins and precursors from the genus Gloeospermum: Filling a blank spot in the cyclotide map of Violaceae". Phytochemistry...

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Pomacea canaliculata

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be infected with pathogenic Angiostrongylus cantonensis in 2009. Crude cyclotide extracts from both Oldenlandia affinis and Viola odorata plants showed...

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Cliotide

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extracts. Cliotides belong to a larger classification of peptides, the cyclotides. Preliminary studies show that cliotides display a variety of biochemical...

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Viola uliginosa

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endangered species conservation and for somaclonal variation-enhanced cyclotide biosynthesis. Plant Cell Tiss Organ Cult 120, 179–190 (2015). doi.org/10...

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List of plants used in herbalism

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W, et al. (August 2010). "Isolation and characterization of cytotoxic cyclotides from Viola tricolor". Peptides. 31 (8): 1434–40. doi:10.1016/j.peptides...

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Cystine knot

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knot (ICK) common in spider and snail toxins Cyclic Cystine Knot, or cyclotide The growth factor cystine knot was first observed in the structure of...

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Rotaxane

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found in naturally occurring peptides, including: cystine knot peptides, cyclotides or lasso-peptides such as microcin J25. The earliest reported synthesis...

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Cyclic peptide

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Ninghua, Tan (2008). "Application of a TLC chemical method to detection of cyclotides in plants". Science Bulletin. 53 (11): 1671–1674. Bibcode:2008SciBu..53...

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Hedyotis

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body pain in fever and malaria. Both hedyotide B1 and B2 belong to the cyclotide superfamily which was known to be an important part of plant innate defense...

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Peripheral membrane protein

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bacteriostatic. Defensins Insect defensins Plant defensins, including Cyclotides and thionins Defensins are a type of antimicrobial peptide; and are an...

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Mechanically interlocked molecular architectures

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examples have been found in biological systems including: cystine knots, cyclotides or lasso-peptides such as microcin J25 which are proteins, and a variety...

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Asparagine endopeptidase

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PMID 18086282. Craik DJ (February 2012). "Host-defense activities of cyclotides". Toxins. 4 (2): 139–56. doi:10.3390/toxins4020139. PMC 3317112. PMID 22474571...

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Viola abyssinica

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rubbed with other herbs in butter to make a massage oil. Several unique cyclotides have been isolated from this species, that have cytotoxic properties and...

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Racemic crystallography

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acids,1 disulfide), conotoxin cVc1.1 (22 amino acids, 2 disul-fides) and cyclotide kB1 (29 amino acids, 3 disulfides). Using X-ray diffraction, it was found...

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Rinorea dentata

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parturition in livestock. Researchers found that the plant contained novel cyclotides, but further research is needed on the efficacy of these extracts. Ojo...

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Susan Wray

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during labour. Her work has also investigated the use of plant-derived cyclotides as well as modifications to the natural hormone oxytocin to serve as templates...

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