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CHD7 information


CHD7
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesCHD7, CRG, HH5, IS3, KAL5, chromodomain helicase DNA binding protein 7
External IDsOMIM: 608892; MGI: 2444748; HomoloGene: 19067; GeneCards: CHD7; OMA:CHD7 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_017780
NM_001316690
NM_017783

NM_001033395
NM_001081417
NM_001277149
NM_001355382

RefSeq (protein)

NP_001303619
NP_060250

NP_001264078
NP_001342311

Location (UCSC)Chr 8: 60.68 – 60.87 MbChr 4: 8.69 – 8.87 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Chromodomain-helicase-DNA-binding protein 7 is an ATP-dependent 'chromatin' or 'nucleosome' remodeling factor [5] that in humans is encoded by the CHD7 gene.[6][7]

CHD7 is an ATP-dependent chromatin remodeler homologous to the Drosophila trithorax-group protein Kismet.[8] Mutations in CHD7 are associated with CHARGE syndrome.[9] This protein belongs to a larger group of ATP-dependent chromatin remodeling complexes, the CHD subfamily.

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000171316 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000041235 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Bouazoune, K; Kingston, RE (20 November 2012). "Chromatin remodeling by the CHD7 protein is impaired by mutations that cause human developmental disorders". Proceedings of the National Academy of Sciences of the United States of America. 109 (47): 19238–43. Bibcode:2012PNAS..10919238B. doi:10.1073/pnas.1213825109. PMC 3511097. PMID 23134727.
  6. ^ Nagase T, Kikuno R, Ishikawa KI, Hirosawa M, Ohara O (Feb 2000). "Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro". DNA Research. 7 (1): 65–73. doi:10.1093/dnares/7.1.65. PMID 10718198.
  7. ^ "Entrez Gene: chromodomain helicase DNA binding protein 7".
  8. ^ Bajpai R, Chen DA, Rada-Iglesias A, Zhang J, Xiong Y, Helms J, Chang CP, Zhao Y, Swigut T, Wysocka J (Feb 2010). "CHD7 cooperates with PBAF to control multipotent neural crest formation". Nature. 463 (7283): 958–62. Bibcode:2010Natur.463..958B. doi:10.1038/nature08733. PMC 2890258. PMID 20130577.
  9. ^ Vissers LE, van Ravenswaaij CM, Admiraal R, Hurst JA, de Vries BB, Janssen IM, van der Vliet WA, Huys EH, de Jong PJ, Hamel BC, Schoenmakers EF, Brunner HG, Veltman JA, van Kessel AG (Sep 2004). "Mutations in a new member of the chromodomain gene family cause CHARGE syndrome". Nature Genetics. 36 (9): 955–7. doi:10.1038/ng1407. PMID 15300250.

and 23 Related for: CHD7 information

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CHD7

Last Update:

by the CHD7 gene. CHD7 is an ATP-dependent chromatin remodeler homologous to the Drosophila trithorax-group protein Kismet. Mutations in CHD7 are associated...

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CHARGE syndrome

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CHARGE syndrome, but the name remains. About two thirds of cases are due to a CHD7 mutation. CHARGE syndrome occurs only in 0.1–1.2 per 10,000 live births;...

Word Count : 1583

Adolescent idiopathic scoliosis

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chromosome 8). Further genetic testing found 23 different polymorphisms in the CHD7 gene of these same patients, all of which were located inside a 116-kb genomic...

Word Count : 4842

Isolated hypogonadotropic hypogonadism

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associated with mutations in KAL1, FGFR1/FGF8, FGF17, IL17RD, PROKR2, NELF, CHD7(which positively regulates GnRH secretion), HS6ST1, FLRT3, SPRY4, DUSP6,...

Word Count : 518

Syndrome

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frequently referred to as "CHARGE association". When the major causative gene (CHD7) for the condition was discovered, the name was changed. The consensus underlying...

Word Count : 1759

Kismet

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2014 superyacht Kismet, a Drosophila Trithorax-group protein homologous to CHD7 Akismet, a server-based spam filter Ashima, Semitic goddess of fate Destiny...

Word Count : 441

Chromatin

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nucleosomes. Studies of Sanosaka et al 2022, says that Chromatin remodeler CHD7 regulate cell type-specific gene expression in human neural crest cells....

Word Count : 5949

Helicase

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helicase DNA binding protein: CHD1, CHD1L, CHD2, CHD3, CHD4, CHD5, CHD6, CHD7, CHD8, CHD9 DEAD box/DEAD/DEAH box helicase: DDX3X, DDX5, DDX6, DDX10, DDX11...

Word Count : 6921

Syndromic autism

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 43% (32.0–53.0) Clinically defined CHARGE syndrome Monogenic disorder: CHD7 8  28% (16–41) Clinically defined Noonan's syndrome Polygenic disorder  15%...

Word Count : 1194

Microphthalmia

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coloboma: ABCB6 ACTB ACTG1 ALDH1A3 ATOH7 BCOR BMP4 BMP7 C12orf57 CC2D2A CHD7 CLDN19 COX7B CRIM1 CRYAA CRYBA4 CRYBB2 DHX38 DPYD ERCC1 ERCC5 FADD FAM111A...

Word Count : 2173

Scoliosis

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development of scoliosis have not been conclusively identified. At least one gene, CHD7, has been associated with the idiopathic form of scoliosis. Several candidate...

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HH5

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novel series, part of the Honorverse fictional milieu created by David Weber CHD7, also known as HH5, the chromodomain-helicase-DNA-binding protein 7 Search...

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List of genetic disorders

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1:100,000 Charcot–Marie–Tooth disease PMP22, MFN2 1:2,500 CHARGE syndrome CHD7 1:8,500-10,000 Chédiak–Higashi syndrome LYST recessive 1:39,000,000 Chondrodysplasia...

Word Count : 969

Chromosome 8

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Coiled-coil domain containing 166 CCDC25: coiled-coil domain containing protein 25 CHD7: chromodomain helicase DNA binding protein 7 CHMP4C: Charged multivesicular...

Word Count : 1896

Chromatin remodeling

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has been linked recently to haploinsufficiency of CHD7, which encodes the CHD family ATPase CHD7. Chromatin architectural remodeling is implicated in...

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Female infertility

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Autosomal 46,XY, male-to-female sex reversal (phenotypically perfect females) CHD7 Chromodomain-helicase-DNA-binding protein 7 CHARGE syndrome and Kallmann...

Word Count : 7114

Ribosomopathy

Last Update:

Ravenswaaij-Arts, C. M.; Hoefsloot, L. H. (2012). "Mutation update on the CHD7 gene involved in CHARGE syndrome". Human Mutation. 33 (8): 1149–60. doi:10...

Word Count : 2436

List of primary immunodeficiencies

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syndrome (when associated with thymic defects) TBX1 deficiency CHARGE syndrome (CHD7 deficiency or SEMA3E deficiency) Winged helix/FOXN1 deficiency Chromosome...

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Syndromic microphthalmia

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Cockayne syndrome type B (CSB), cerebro-oculo-facio-skeletal syndrome 1 (COFS1) CHD7 AD CHARGE syndrome HDAC6 XLD Chondrodysplasia with platyspondyly, distinctive...

Word Count : 538

Genetics of GnRH deficiency conditions

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6-16, 5-10 146110 GNRHR GNRHR 4q13.2 Autosomal recessive 6, 5-10 612370 CHD7 CHD7 8q12.2 Congenital hearing loss. Semicircular canal hypoplasia. CHARGE...

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TBX1

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protein. TBX1 is thought to operate on the same developmental pathway as CHD7 which can be mutated in CHARGE syndrome. Most cases of 22q11.2 deletion syndrome...

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Laura Attardi

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CHARGE and died. Researchers also demonstrated a link between p53 and the CHD7 gene, which often displays mutations in cases of CHARGE. Attardi uses mice...

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List of OMIM disorder codes

Last Update:

neuropathy, X-linked dominant, 1; 302800; GJB1 CHARGE syndrome; 214800; CHD7 CHARGE syndrome; 214800; SEMA3E Chédiak–Higashi syndrome; 214500; CHS1 Cherubism;...

Word Count : 18877

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