The Zebrafish Information Network (ZFIN) is an online biological database of information about the zebrafish (Danio rerio). The zebrafish is a widely used model organism for genetic, genomic, and developmental studies, and ZFIN provides an integrated interface for querying and displaying the large volume of data generated by this research.[2] To facilitate use of the zebrafish as a model of human biology, ZFIN links these data to corresponding information about other model organisms (e.g., mouse) and to human disease databases.[3] Abundant links to external sequence databases (e.g., GenBank) and to genome browsers are included. Gene product, gene expression, and phenotype data are annotated with terms from biomedical ontologies. ZFIN is based at the University of Oregon in the United States, with funding provided by the National Institutes of Health (NIH).
^Bradford, Yvonne; Conlin, Tom; Dunn, Nathan; Fashena, David; Frazer, Ken; Howe, Douglas G; Knight, Jonathan; Mani, Prita; Martin, Ryan; Moxon, Sierra A. T.; Paddock, Holly; Pich, Christian; Ramachandran, Sridhar; Ruef, Barbara J; Ruzicka, Leyla; Bauer Schaper, Holle; Schaper, Kevin; Shao, Xiang; Singer, Amy; Sprague, Judy; Sprunger, Brock; Van Slyke, Ceri; Westerfield, Monte (Jan 2011). "ZFIN: enhancements and updates to the Zebrafish Model Organism Database". Nucleic Acids Res. 39 (Database issue). England: D822-9. doi:10.1093/nar/gkq1077. PMC 3013679. PMID 21036866.
^Sprague et al. (2008). The Zebrafish Information Network: the zebrafish model organism database provides expanded support for genotypes and phenotypes. Nucleic Acids Res 36:D768.
^The Zebrafish Database Project
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The zebrafish (Danio rerio) is a freshwater fish belonging to the minnow family (Cyprinidae) of the order Cypriniformes. Native to India and South Asia...
association with other annotation databases, such as ZFIN (The ZebrafishInformationNetwork), the Havana Group and GenBank. Manual annotation is currently...
Intelligence Research Lab, and it is the home of the ZebrafishInformationNetwork (ZFIN), the zebrafish model organism database. Controversy stems from the...
laevis ZebrafishInformationNetwork: genome of this fish model organism PHI-base: pathogen-host interaction database. It links gene information to phenotypic...
anatomy ontology was developed from the zebrafish anatomy ontology developed by the ZebrafishInformationNetwork. Edmunds, Richard C.; Su, Baofeng; Balhoff...
based on homology and phenotype information of these links: Mouse Genome Informatics (MGI), ZebrafishInformationNetwork (ZFIN), Saccharomyces Genome Database...
Conlin T, Eagle AE, Fashena D, Frazer K, et al. (January 2013). "ZFIN, the Zebrafish Model Organism Database: increased support for mutants and transgenics"...
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protein-associated information. Harvester currently works for human, mouse, rat, zebrafish, drosophila and arabidopsis thaliana based information. Harvester cross-links...
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Advanced Network Technology Center at the University of Oregon to allow Internet users to view global Border Gateway Protocol routing information from the...
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