Predicted secondary structure and sequence conservation of RydC
Identifiers
Symbol
RydC
Rfam
RF00505
Other data
RNA type
Gene; sRNA
Domain(s)
Bacteria
SO
SO:0000655
PDB structures
PDBe
RydC is a bacterial non-coding RNA. RydC is thought to regulate a mRNA, yejABEF, which encodes an ABC transporter protein. RydC is known to bind the Hfq protein, which causes a conformational change in the RNA molecule. The Hfq/RydC complex is then thought to bind to the target mRNA and induce its degradation.[1]
^Antal M, Bordeau V, Douchin V, Felden B (March 2005). "A small bacterial RNA regulates a putative ABC transporter". The Journal of Biological Chemistry. 280 (9): 7901–8. doi:10.1074/jbc.M413071200. PMID 15618228.
change in the RNA molecule. The Hfq/RydC complex is then thought to bind to the target mRNA and induce its degradation. RyfA RNARydB RNA RybB RNA Antal M,...
The RydB RNA is a non-coding RNA originally identified in E. coli in an RNA screen. This gene is only 67 nucleotides in length and is composed of a hairpin...
was one of two RNA genes identified in this interval. Other RNAs using this nomenclature include RydB RNA, RyeB RNA, RyeE RNA and RyfA RNA. Tjaden B, Goodwin...
greater variation than the normally used 16srRNA gene results in classification similar to that derived from 16s rRNA data but with more detailed subdivisions"...
of specific proteins by complementary binding to their mRNA transcripts. The HMGA2 mature mRNA transcript contains seven regions complementary or nearly...
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