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Oxalate oxidoreductase information


Oxalate oxidoreductase
Identifiers
EC no.1.2.7.10
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Oxalate oxidoreductases (EC 1.2.7.10) (OOR) are a relatively recently discovered group of enzymes that break down oxalate, a problematic molecule nutritionally. The first one to have been characterized has the systematic name oxalate:ferredoxin oxidoreductase.[1][2] This enzyme catalyses the following chemical reaction:

oxalate + oxidized ferredoxin 2 CO2 + reduced ferredoxin

This enzyme contains thiamine diphosphate and [4Fe-4S] clusters.[further explanation needed]

Another OOR from acetogenic bacteria, a thiamine pyrophosphate (TPP)-dependent OOR, had its mechanism of action decoded step by step under X-ray crystallography to rather simplistically (one-carbon) split oxalate, producing low-potential electrons and CO2.[3]

  1. ^ Daniel SL, Pilsl C, Drake HL (February 2004). "Oxalate metabolism by the acetogenic bacterium Moorella thermoacetica". FEMS Microbiology Letters. 231 (1): 39–43. doi:10.1016/S0378-1097(03)00924-8. PMID 14769464.
  2. ^ Pierce E, Becker DF, Ragsdale SW (December 2010). "Identification and characterization of oxalate oxidoreductase, a novel thiamine pyrophosphate-dependent 2-oxoacid oxidoreductase that enables anaerobic growth on oxalate". The Journal of Biological Chemistry. 285 (52): 40515–24. doi:10.1074/jbc.M110.155739. PMC 3003350. PMID 20956531.
  3. ^ Gibson MI, Chen PY, Johnson AC, Pierce E, Can M, Ragsdale SW, Drennan CL (January 2016). "One-carbon chemistry of oxalate oxidoreductase captured by X-ray crystallography". Proceedings of the National Academy of Sciences of the United States of America. 113 (2): 320–5. Bibcode:2016PNAS..113..320G. doi:10.1073/pnas.1518537113. PMC 4720323. PMID 26712008.

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Oxalate oxidoreductase

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this enzyme are oxalate, O2, and H+, whereas its two products are CO2 and H2O2. This enzyme belongs to the family of oxidoreductases, specifically those...

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Glyoxylate oxidase

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\rightleftharpoons } oxalate + H2O2 The 3 substrates of this enzyme are glyoxylate, H2O, and O2, whereas its two products are oxalate and H2O2. This enzyme...

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Oxalate degrading enzyme

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An oxalate degrading enzyme is a type of enzyme that catalyzes the biodegradation of oxalate. Enzymes in this class include oxalate oxidase, oxalate decarboxylase...

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Manganese peroxidase

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The systematic name of this enzyme class is Mn(II):hydrogen-peroxide oxidoreductase. Other names in common use include peroxidase-M2, and Mn-dependent (NADH-oxidizing)...

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Glycerate dehydrogenase

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acceptor. The systematic name of this enzyme class is (R)-glycerate:NAD+ oxidoreductase. Other names in common use include D-glycerate dehydrogenase, and hydroxypyruvate...

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Toxication

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accumulation of the end product of the ethylene glycol mechanism, calcium oxalate, may cause malfunction in the kidney and lead to more severe consequences...

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Cytochrome b5 reductase

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in organisms. The cytochrome b5 reductase enzyme contains a typical oxidoreductase structure with a diaphorase binding domain complex for NADH and a FAD-binding...

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Glyoxylate reductase

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or NADPH. The systematic name of this enzyme class is glycolate:NAD+ oxidoreductase. Other names in common use include NADH-glyoxylate reductase, glyoxylic...

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Uric acid

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plain X-ray. Uric acid crystals can also promote the formation of calcium oxalate stones, acting as "seed crystals". Hyperuricemia is associated with components...

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Microbial metabolism

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fermentation include succinate fermentation by Propionigenium modestum and oxalate fermentation by Oxalobacter formigenes. These reactions are extremely low-energy...

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Iron

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photographic processes. The dihydrate of iron(II) oxalate has a polymeric structure with co-planar oxalate ions bridging between iron centres with the water...

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List of enzymes

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(NADP) EC 1.1.1.2 Homoserine dehydrogenase EC 1.1.1.3 Aminopropanol oxidoreductase EC 1.1.1.4 Diacetyl reductase EC 1.1.1.5 Glycerol dehydrogenase EC 1...

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Mitochondrial membrane transport protein

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site of the mitochondrial electron transport chain. NADH/ubiquinone oxidoreductase, also known as complex I, is the first and largest protein in the mitochondrial...

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Zinc

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Among important applications are: The Frankland-Duppa Reaction in which an oxalate ester (ROCOCOOR) reacts with an alkyl halide R'X, zinc and hydrochloric...

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Transporter Classification Database

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Oxidoreductase D (DsbD) Family 5.A.2 The Disulfide Bond Oxidoreductase B (DsbB) Family 5.A.3 The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO)...

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Membrane transport protein

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membrane include two-electron carriers, such as the disulfide bond oxidoreductases (DsbB and DsbD in E. coli) as well as one-electron carriers such as...

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Mitochondrial dicarboxylate carrier

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dicarboxylic acid transport sulfide oxidation, using sulfide:quinone oxidoreductase ion transport mitochondrial transport sulfate transport thiosulfate...

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