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NiFe hydrogenase information


[NiFe] hydrogenase is a type of hydrogenase, which is an oxidative enzyme that reversibly converts molecular hydrogen in prokaryotes including Bacteria and Archaea.[1][2] The catalytic site on the enzyme provides simple hydrogen-metabolizing microorganisms a redox mechanism by which to store and utilize energy via the reaction

This is particularly essential for the anaerobic, sulfate-reducing bacteria of the genus Desulfovibrio[3][4] as well as pathogenic organisms Escherichia coli and Helicobacter pylori.[2] The mechanisms, maturation, and function of [NiFe] hydrogenases are actively being researched for applications to the hydrogen economy and as potential antibiotic targets.

  1. ^ Jugder, Bat-Erdene; Welch, Jeffrey; Aguey-Zinsou, Kondo-Francois; Marquis, Christopher P. (2013-05-14). "Fundamentals and electrochemical applications of [Ni–Fe]-uptake hydrogenases". RSC Advances. 3 (22): 8142. doi:10.1039/c3ra22668a. ISSN 2046-2069.
  2. ^ a b Vignais, Paulette M.; Billoud, Bernard (October 2007). "Occurrence, Classification, and Biological Function of Hydrogenases: An Overview". Chemical Reviews. 107 (10): 4206–4272. doi:10.1021/cr050196r. PMID 17927159.
  3. ^ Volbeda, A.; Garcin, E.; Piras, C.; de Lacey, A. L.; Fernandez, V. M.; Hatchikian, E. C.; Frey, M.; Fontecilla-Camps, J. C. (1996). "Structure of the [NiFe] Hydrogenase Active Site: Evidence for Biologically Uncommon Fe Ligands". J. Am. Chem. Soc. 118 (51): 12989–12996. doi:10.1021/ja962270g.
  4. ^ Eidsness, M. K.; Scott, R. A.; Prickril, B. C.; DerVartanian, D. V.; Legall, J.; Moura, I.; Moura, J. J.; Peck, H. D. (1989). "Evidence for selenocysteine coordination to the active site nickel in the [NiFeSe]hydrogenases from Desulfovibrio baculatus". Proceedings of the National Academy of Sciences. 86 (1): 147–151. doi:10.1073/pnas.86.1.147. PMC 286421. PMID 2521386.

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NiFe hydrogenase

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[NiFe] hydrogenase is a type of hydrogenase, which is an oxidative enzyme that reversibly converts molecular hydrogen in prokaryotes including Bacteria...

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Hydrogenase

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nickel-iron hydrogenase, and iron hydrogenase. Hydrogenases catalyze, sometimes reversibly, H2 uptake. The [FeFe] and [NiFe] hydrogenases are true redox...

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Cupriavidus necator

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Fontecilla-Camps, J. (1996). "Structure of the [NiFe] Hydrogenase Active Site: Evidence for Biologically Uncommon Fe Ligands". J. Am. Chem. Soc. 118 (51): 12989–12996...

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Enzymatic biofuel cell

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networks. These hybrids have been prepared using [FeFe] and [NiFe] hydrogenases. The [NiFe] hydrogenase isolated from A. aeolicus (thermophilic bacteria)...

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Cyanide

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cyanide. The hydrogenase enzymes contain cyanide ligands attached to iron in their active sites. The biosynthesis of cyanide in the NiFe hydrogenases proceeds...

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Hydrogenase mimic

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compounds of the [Fe] hydrogenase. More recently Manor and Rauchfuss presented a very interesting mimic compound based in the [NiFe] hydrogenase with bidirectional...

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Hydrogenase maturation protease family

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hydrogenase maturation protease family is a family of aspartic endopeptidases belonging to MEROPS family A31. The large subunit of [NiFe]-hydrogenase...

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Wolfgang Lubitz

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[NiFe]-hydrogenases were obtained. In the course of this work a 0.89 Ångström resolution X-ray crystallography diffraction model of [NiFe]-hydrogenase...

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Nickel

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oxidation state is important to nickel-containing enzymes, such as [NiFe]-hydrogenase, which catalyzes the reversible reduction of protons to H2. Nickel(II)...

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Metalloprotein

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hydrogenase, and iron hydrogenase. All hydrogenases catalyze reversible H2 uptake, but while the [FeFe] and [NiFe] hydrogenases are true redox catalysts...

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Ferredoxin hydrogenase

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ferredoxin hydrogenase (EC 1.12.7.2), also referred to as [Fe-Fe] hydrogenase, H2 oxidizing hydrogenase, H2 producing hydrogenase, bidirectional hydrogenase, hydrogenase...

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Isotopes of nickel

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Maurice van Gastel; Wolfgang Lubitz (2009). "EPR Investigation of [NiFe] Hydrogenases". In Graeme Hanson; Lawrence Berliner (eds.). High Resolution EPR:...

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Bioorganometallic chemistry

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[FeFe]-hydrogenases have a Fe2(μ-SR)2(μ-CO)(CO)2(CN)2 active site connected to a 4Fe4S cluster via a bridging thiolate. The active site of the [NiFe]-hydrogenases...

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Hydrogen cycle

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Shepard EM, Broderick JB, King PW, Adams MW (June 2015). "[FeFe]- and [NiFe]-hydrogenase diversity, mechanism, and maturation" (PDF). Biochimica et Biophysica...

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Cysteine

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blue copper proteins, iron in cytochrome P450, and nickel in the [NiFe]-hydrogenases. The sulfhydryl group also has a high affinity for heavy metals, so...

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Electron bifurcation

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"Structure and Electron Transfer Pathways of an Electron-Bifurcating NiFe-Hydrogenase". Science Advances. 8 (8): eabm7546. doi:10.1126/sciadv.abm7546. PMC 8880783...

Word Count : 226

Artificial photosynthesis

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"Structural and Functional Analogues of the Active Sites of the [Fe]-, [NiFe]-, and [FeFe]-Hydrogenases". Chemical Reviews. 109 (6): 2245–2274. doi:10.1021/cr800542q...

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Biohydrogen

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active site metal content: [FeFe]-hydrogenases (iron-iron), [NiFe]-hydrogenases (nickel-iron) hydrogenases, and [Fe]-hydrogenases (iron-only). Many organisms...

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Aquifex

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"Characterization of a unique [FeS] cluster in the electron transfer chain of the oxygen tolerant [NiFe] hydrogenase from Aquifex aeolicus". Proceedings...

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HycI peptidase

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endopeptidase HycI from Escherichia coli: implications for mechanism of the [NiFe] hydrogenase maturation". The Journal of Biological Chemistry. 282 (6): 3856–63...

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Nickel compounds

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{\displaystyle {\ce {H2}}} using two membrane-associated, oxygen-dependent [NiFe] hydrogenases". Proceedings of the National Academy of Sciences. 111 (11): 4257–4261...

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Sulfurimonas

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[NiFe]-hydrogenase. The reaction being H 2 ⟷ 2 H + + 2 e − {\displaystyle H_{2}\longleftrightarrow 2H^{+}+2e^{-}} . There are many different [NiFe]-hydrogenases...

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Thermocrinis jamiesonii

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was present, which is required for thiosulfate oxidation. It lacks NiFe hydrogenase (hyaB) and formate dehydrogenase genes (fdhA), indicating that it cannot...

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