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Molecular Query Language information


The Molecular Query Language (MQL) was designed to allow more complex, problem-specific search methods in chemoinformatics. In contrast to the widely used SMARTS queries, MQL provides for the specification of spatial and physicochemical properties of atoms and bonds. Additionally, it can easily be extended to handle non-atom-based graphs, also known as "reduced feature" graphs. The query language is based on an extended Backus–Naur form (EBNF) using JavaCC.

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Molecular Query Language

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The Molecular Query Language (MQL) was designed to allow more complex, problem-specific search methods in chemoinformatics. In contrast to the widely used...

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MQL

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Language, the programming language of Freebase software Mildura Airport, IATA code MQL Molecular Query Language, a query language used in chemoinformatics...

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Molecule mining

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SAm/AIm/RHC AFGen gRed G-Hash BPZ ChemNet CCS MolNet Graph machines Molecular Query Language Chemical graph theory Chemical space QSAR ADME partition coefficient...

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Hierarchical editing language for macromolecules

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organizations. Simplified molecular-input line-entry system (SMILES) International Chemical Identifier (InChI) Molecular Query Language Molecule editor Chemical...

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International Chemical Identifier

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contain, which is a problem for linking databases. Molecular Query Language Simplified molecular-input line-entry system (SMILES) Molecule editor SYBYL...

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PubMed

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that "usage has remained minimal". askMEDLINE, a free-text, natural language query tool for MEDLINE/PubMed, developed by the NLM, also suitable for handhelds...

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Graph Modelling Language

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and gv2gml) that can convert to and from the DOT file format. Graph Query Language (GQL) GML: A portable Graph File Format, Michael Himsolt - 2010/11/30...

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Object database

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some kind of query language, allowing objects to be found using a declarative programming approach. It is in the area of object query languages, and the integration...

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Smarts

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Smiles arbitrary target specification, a line notation language for specifying molecular query patterns Smarts Mountain, a mountain in New Hampshire Small...

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Molecule editor

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illustrations or to query chemical databases. Three-dimensional output is used to build molecular models, usually as part of molecular modelling software...

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National Center for Biotechnology Information

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finding sequences similar to the query sequence within the same organism or in different organisms. It searches the query sequence on NCBI databases and...

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Chemical file format

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a chemically aware server. Chemical Markup Language (CML) is an open standard for representing molecular and other chemical data. The open source project...

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Sequence alignment

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ambiguous. “Consumes query” and “consumes reference” indicate whether the CIGAR operation causes the alignment to step along the query sequence and the reference...

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XML database

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standard for querying XML data per W3C recommendation is XQuery; the latest version is XQuery 3.1. XQuery includes XPath as a sub-language and XML itself...

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Rho

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lower-case rho "⍴" means reshape in the APL programming language, and by extension also queries shape The lower-case rho "ρ" is used for the unary rename...

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Open reading frame

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In molecular biology, reading frames are defined as spans of DNA sequence between the start and stop codons. Usually, this is considered within a studied...

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Document retrieval

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Document retrieval is defined as the matching of some stated user query against a set of free-text records. These records could be any type of mainly...

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Database model

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operations may not be explicit in a particular query language, they provide the foundation on which a query language is built. The flat (or table) model consists...

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Risus sardonicus

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Redazione (2023-01-23). "Il sacrificio degli anziani nella Sardegna antica, tra mito e tracce storiche". Query Online (in Italian). Retrieved 2023-07-22....

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Liver support system

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automatic calculations of most liver rand ICU scoring systems, instant queries online, instant export of all patients included in the database of each...

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SYBYL line notation

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can specify molecules, molecular queries, and reactions in a single line notation whereas SMILES handles these through language extensions. SLN has support...

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Stream processing

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for these systems includes components such as programming models and query languages, for expressing computation; stream management systems, for distribution...

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Bioinformatics

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literature and the development of biological and gene ontologies to organize and query biological data. It also plays a role in the analysis of gene and protein...

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World Wide Web

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programs can interact with the document via Document Object Model, or DOM, to query page state and alter it. The same client-side techniques can then dynamically...

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Sardonicism

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sacrificio degli anziani nella Sardegna antica, tra mito e tracce storiche". Query Online (in Italian). Retrieved 2023-07-22. Look up sardonic in Wiktionary...

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List of artificial intelligence projects

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synthetic brain by reverse-engineering the mammalian brain down to the molecular level. Google Brain, a deep learning project part of Google X attempting...

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