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IntFOLD information


The IntFOLD server
Developer(s)Prof Liam McGuffin

Dr Recep Adiyaman

Dr Bajuna Salehe
Stable release
IntFOLD version 5.0
Preview release
IntFOLD version 6.0
Written inJava,

Python,

R
Websitehttps://www.reading.ac.uk/bioinf/IntFOLD/

IntFOLD (Integrated Fold Recognition) is fully automated, integrated pipeline for prediction of 3D structure and function from amino acid sequences.[1] The pipeline is wrapped up and deployed as a Web Server. The core of the server method is quality assessment using built-in accuracy self-estimates (ASE) which improves performance prediction of 3D model using ModFOLD.[2]

  1. ^ McGuffin, Liam J; Adiyaman, Recep; Maghrabi, Ali H A; Shuid, Ahmad N; Brackenridge, Danielle A; Nealon, John O; Philomina, Limcy S (2019-05-02). "IntFOLD: an integrated web resource for high performance protein structure and function prediction". Nucleic Acids Research. 47 (W1): W408–W413. doi:10.1093/nar/gkz322. ISSN 0305-1048. PMC 6602432. PMID 31045208.
  2. ^ Cite error: The named reference :2 was invoked but never defined (see the help page).

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IntFOLD

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IntFOLD (Integrated Fold Recognition) is fully automated, integrated pipeline for prediction of 3D structure and function from amino acid sequences. The...

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List of protein structure prediction software

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Name Method Description Release date IntFOLD A unified interface for: Tertiary structure prediction/3D modelling, 3D model quality assessment, Intrinsic...

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AlphaFold

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response to the infection. Alternatives to AlphaFold have emerged, such as ESMFold, OmegaFold, RoseTTAFold, IntFOLD, and RaptorX. Andrew W. Senior et al. (December...

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Constant folding

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constant folding, yields: int a = 30; int b = 3; int c; c = b * 4; if (c > 10) { c = c - 10; } return c * 2; Repeating both steps twice produces: int a = 30;...

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ServInt

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number of ServInt clients folding from the collapse forced ServInt to file Chapter 11 Bankruptcy protection in February 2001. ServInt emerged from bankruptcy...

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Cumulative distribution function

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{\displaystyle {\begin{aligned}x(1-F_{X}(x))&\leq \int _{x}^{\infty }tdF_{X}(t)\\xF_{X}(-x)&\leq \int _{-\infty }^{-x}(-t)dF_{X}(t)\end{aligned}}} as shown...

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List of related male and female reproductive organs

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further subdivides into the posterior anal folds and the anterior urethral folds. Bilateral to the urethral fold, genital swellings become prominent. These...

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Argentina

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decreasing mortality, the Argentine population grew fivefold and the economy 15-fold: from 1870 to 1910, Argentina's wheat exports went from 100,000 to 2,500...

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Stark effect

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Convolution

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G(s)&=\int _{-\infty }^{\infty }e^{-su}\ f(u)\ {\text{d}}u\cdot \int _{-\infty }^{\infty }e^{-sv}\ g(v)\ {\text{d}}v\\&=\int _{-\infty }^{\infty }\int _{-\infty...

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Papua New Guinea

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Folded normal distribution

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Israel

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INI file

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Hungary

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Retrieved 2 April 2022. WIPO. "Global Innovation Index 2023, 15th Edition". wipo.int. doi:10.34667/tind.46596. Retrieved 28 October 2023. "Researchers in R&D...

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OCaml

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sum [1;2;3;4;5];; - : int = 15 Another way is to use standard fold function that works with lists. let sum integers = List.fold_left (fun accumulator...

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Anonymous function

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IntegerMath { int operation(int a, int b); default IntegerMath swap() { return (a, b) -> operation(b, a); } } private static int apply(int a, int b, IntegerMath...

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Dead code

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inline functions and enabling the use of link-time optimization. int foo (int iX, int iY) { int iZ = iX/iY; return iX*iY; } In the above example, although the...

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Option type

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None | Some of 'a. let show_value = Option.fold ~none:"No value" ~some:(fun x -> "The value is: " ^ string_of_int x) let () = let full = Some 42 in let empty...

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Tagged union

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Rectangle(length: Int, height: Int, centerX: Int, centerY: Int) extends Shape(centerX, centerY) case Circle(radius: Int, centerX: Int, centerY: Int) extends Shape(centerX...

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Nepal

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Fault Analysis by 2D Finite Element Modeling for Studying the Himalayan Fold and Thrust belt in Nepal". Journal of Asian Earth Sciences. 29 (2–3): 473–489...

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AB magnitude

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m_{\text{AB}}\approx -2.5\log _{10}\left({\frac {\int f_{\nu }{(h\nu )}^{-1}e(\nu )\,\mathrm {d} \nu }{\int 3\,631{\text{ Jy}}\,{(h\nu )}^{-1}e(\nu )\,\mathrm...

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Dipole antenna

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XOR swap algorithm

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location. A C function that implements the XOR swap algorithm: void XorSwap(int *x, int *y) { if (x == y) return; *x ^= *y; *y ^= *x; *x ^= *y; } The code first...

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