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DNA Data Bank of Japan information


DNA Data Bank of Japan
Content
DescriptionJapanese DNA data bank
Organismsall
Contact
Research centerInternational Nucleotide Sequence Database Collaboration
National Institute of Genetics
LaboratoryCenter for Information Biology and DNA Data Bank of Japan
Primary citationPMID 11752245
Release date1786
Access
Websitehttp://www.ddbj.nig.ac.jp

The DNA Data Bank of Japan (DDBJ) is a biological database that collects DNA sequences.[1][2] It is located at the National Institute of Genetics (NIG) in the Shizuoka prefecture of Japan. It is also a member of the International Nucleotide Sequence Database Collaboration or INSDC. It exchanges its data with European Molecular Biology Laboratory at the European Bioinformatics Institute and with GenBank at the National Center for Biotechnology Information on a daily basis. Thus these three databanks contain the same data at any given time.

  1. ^ Tateno Y, Imanishi T, Miyazaki S, Fukami-Kobayashi K, Saitou N, Sugawara H, et al. (2002). "DNA Data Bank of Japan (DDBJ) for genome scale research in life science". Nucleic Acids Res. 30 (1): 27–30. doi:10.1093/nar/30.1.27. PMC 99140. PMID 11752245.
  2. ^ Kaminuma E, Kosuge T, Kodama Y, et al. (January 2011). "DDBJ progress report". Nucleic Acids Res. 39 (Database issue): D22–7. doi:10.1093/nar/gkq1041. PMC 3013661. PMID 21062814.

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DNA Data Bank of Japan

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The DNA Data Bank of Japan (DDBJ) is a biological database that collects DNA sequences. It is located at the National Institute of Genetics (NIG) in the...

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Streptococcus gordonii

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sequence of S. gordonii CCUG 33482 type strain was deposited and published in DNA Data Bank of Japan, European Nucleotide Archive and GenBank in 2016 under...

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Sequence Read Archive

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the NCBI, the European Bioinformatics Institute (EBI), and the DNA Data Bank of Japan (DDBJ). The archive was established by the National Center for Biotechnology...

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European Nucleotide Archive

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of the International Nucleotide Sequence Database Collaboration (INSDC) along with the DNA Data Bank of Japan and GenBank. The ENA has grown out of the...

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Staphylococcus borealis

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volunteers. The genome sequence of the type strain is deposited in DNA Data Bank of Japan, European Nucleotide Archive and GenBank under the accession number...

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International Nucleotide Sequence Database Collaboration

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databases: NIG's DNA Data Bank of Japan (Japan), NCBI's GenBank (USA) and the EMBL-EBI's European Nucleotide Archive (EMBL). New and updated data on nucleotide...

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National Institute of Genetics

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of Genetics ("Japanese Institute of Genetics") is a Japanese institution founded in 1949. It hosts the DNA Data Bank of Japan. "National Institute of...

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Mycobacteroides chelonae

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published in DNA Data Bank of Japan, European Nucleotide Archive, and GenBank in 2016 under the accession number CP007220. On average, two cases of nonpulmonary...

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Scandinavium goeteborgense

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its genome sequence is publicly available in DNA Data Bank of Japan, European Nucleotide Archive and GenBank under the accession number LYLP00000000. Marathe...

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Moraxella catarrhalis

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sequence of M. catarrhalis CCUG 353 type strain was deposited and published in DNA Data Bank of Japan, European Nucleotide Archive, and GenBank in 2016...

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National Center for Biotechnology Information

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Streptococcus pyogenes

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sequences of the type strain of S. pyogenes (NCTC 8198T = CCUG 4207T) are available in DNA Data Bank of Japan, European Nucleotide Archive, and GenBank under...

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Acinetobacter guerrae

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The draft genome sequence of the type strain is deposited in DNA Data Bank of Japan, European Nucleotide Archive, and GenBank under the accession number...

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Consortium for the Barcode of Life

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standard that GenBank, the European Bioinformatics Institute, and the DNA Data Bank of Japan have endorsed. CBOL's Plant Working Group proposed matK and rbcL...

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List of biological databases

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Database (INSD). The include: DNA Data Bank of Japan (National Institute of Genetics) EMBL (European Bioinformatics Institute) GenBank (National Center for Biotechnology...

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Corynebacterium alimapuense

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The draft genome sequence of the type strain is deposited in DNA Data Bank of Japan, European Nucleotide Archive and GenBank under the accession number...

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Acinetobacter portensis

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The draft genome sequence of the type strain is deposited in DNA Data Bank of Japan, European Nucleotide Archive and GenBank under the accession number...

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Alcaligenes aquatilis

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publicly available in DNA Data Bank of Japan, European Nucleotide Archive, and GenBank.[2] "IPSN LPSN". Retrieved 2013-07-18. "Straininfo of Alcaligenes aquatilis"...

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Gene polymorphism

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evolving area of drug safety research. Resources such as HapMap, DbSNP,Ensembl, DNA Data Bank of Japan, DrugBank, Kyoto Encyclopedia of Genes and Genomes...

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China National GeneBank

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development of high-density DNA storage technology. Australia Bioinformatics Resource Australian Grains Genebank DNA Data Bank of Japan (DDBJ) European...

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Cupriavidus basilensis

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been determined and is publicly available at DNA Data Bank of Japan, European Nucleotide Archive and GenBank, under the accession numbers CP062803, CP062804...

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Autophagy database

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Genomics, DNA Research, and, most notably for our purposes, the DNA Data Bank. NIG is a division of the Japanese Research Organization of Information...

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Halorubrum distributum

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Mikroorganismen und Zellkulturen. Retrieved 2022-07-14. Page Taxon Information: Halorubrum litoreum on "DDBJ - DNA Data Bank of Japan". Retrieved 2022-07-14. v t e...

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Transcriptomics technologies

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Biotechnology Information; EBI – European Bioinformatics Institute; DDBJ – DNA Data Bank of Japan; ENA – European Nucleotide Archive; MIAME – Minimum Information...

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Mycobacteroides immunogenum

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sequence of Mycobacteroides immunogenum CCUG 47286T was deposited and published in DNA Data Bank of Japan, European Nucleotide Archive, and GenBank in 2016...

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Anatomography

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Kousaku Okubo [ja], professor of the DNA Data Bank of Japan at the National Institute of Genetics. Human body polygon data used in the site are called "BodyParts3D"...

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European Bioinformatics Institute

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United States National Library of Medicine National Institute of Genetics (DNA Data Bank of Japan) Swiss Institute of Bioinformatics (SIB: Expasy) Australia...

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Takashi Gojobori

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Fukuoka) is a Japanese molecular biologist, Vice-Director of the National Institute of Genetics (NIG) and the DNA Data Bank of Japan (DDBJ) at NIG, in...

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Pseudomonas balearica

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complete genome sequence of P. balearica type strain DSM 6083T (= CCUG 44595T = SP1402T) is publicly available in DNA Data Bank of Japan, European Nucleotide...

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