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Association mapping information


In genetics, association mapping, also known as "linkage disequilibrium mapping", is a method of mapping quantitative trait loci (QTLs) that takes advantage of historic linkage disequilibrium to link phenotypes (observable characteristics) to genotypes (the genetic constitution of organisms), uncovering genetic associations.[1][2]

  1. ^ Breseghello, Flavio; Sorrells, Mark E (2006-02-01). "Association Mapping of Kernel Size and Milling Quality in Wheat ( Triticum aestivum L.) Cultivars". Genetics. 172 (2): 1165–1177. doi:10.1534/genetics.105.044586. ISSN 1943-2631. PMC 1456215. PMID 16079235.
  2. ^ Zondervan, Krina T.; Cardon, Lon R. (2007-02-01). "Designing candidate gene and genome-wide case–control association studies". Nature Protocols. 2 (10): 2492–2501. doi:10.1038/nprot.2007.366. ISSN 1750-2799. PMC 4180089. PMID 17947991.

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Association mapping

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In genetics, association mapping, also known as "linkage disequilibrium mapping", is a method of mapping quantitative trait loci (QTLs) that takes advantage...

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Nested association mapping

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Nested association mapping (NAM) is a technique designed by the labs of Edward Buckler, James Holland, and Michael McMullen for identifying and dissecting...

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Quantitative trait locus

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method for QTL mapping. Family-based QTL mapping, or Family-pedigree based mapping (Linkage and association mapping), involves multiple families instead of...

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Web mapping

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Web mapping or an online mapping is the process of using, creating, and distributing maps on the World Wide Web (the Web), usually through the use of Web...

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Gene mapping

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with relative gene positions. Genetic mapping on the other hand uses genetic techniques to indirectly find association between genes. Techniques can include...

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Edward Buckler

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other crops such as cassava. He originated the concept of Nested association mapping and created the first population designed for this type of quantitative...

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Mind map

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preferred methods of note taking. A meta study about concept mapping concluded that concept mapping is more effective than "reading text passages, attending...

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Physical mapping

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gene mapping techniques which can determine the sequence of DNA base pairs with high accuracy. Genetic mapping, another approach of gene mapping, can...

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Molecular breeding

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basis of genotypic assays. The areas of molecular breeding include: QTL mapping or gene discovery Marker assisted selection and genomic selection Genetic...

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Restriction site associated DNA markers

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for association mapping, QTL-mapping, population genetics, ecological genetics and evolutionary genetics. The use of RAD markers for genetic mapping is...

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Identity by descent

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simultaneously in multiple individuals Association mapping Genetic association Genetic linkage Genome-wide association study Identity by type Linkage disequilibrium...

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Chickpea

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1017/S0007114512000797. PMID 22916806. Elango, Dinakaran (2022). "Genome-wide association mapping of seed oligosaccharides in chickpea". Frontiers in Plant Science...

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Tone mapping

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Tone mapping is a technique used in image processing and computer graphics to map one set of colors to another to approximate the appearance of high-dynamic-range...

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Power mapping

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Power mapping is a visual tool used by social advocates to identify the best individuals to target to promote social change. The role of relationships...

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Crime mapping

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Crime mapping is used by analysts in law enforcement agencies to map, visualize, and analyze crime incident patterns. It is a key component of crime analysis...

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Date palm

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Hazzouri KM, Gros-Balthazard M, Flowers JM, et al. (2019). "Genome-wide association mapping of date palm fruit traits". Nature Communications. 10 (1): 4680....

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Topographic map

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In modern mapping, a topographic map or topographic sheet is a type of map characterized by large-scale detail and quantitative representation of relief...

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Maize

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and Sood, both in 2014. In 2018, Zerka Rashid of CIMMYT used its association mapping panel, developed for tropical drought tolerance traits. to find new...

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Fast mapping

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In cognitive psychology, fast mapping is the term used for the hypothesized mental process whereby a new concept is learned (or a new hypothesis formed)...

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Inclusive composite interval mapping

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inclusive composite interval mapping (ICIM) has been proposed as an approach to QTL (quantitative trait locus) mapping for populations derived from bi-parental...

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Coalescent theory

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^ Zöllner S. and Pritchard J.K. (2005) Coalescent-Based Association Mapping and Fine Mapping of Complex Trait Loci Genetics 169:1071–1092 ^ Rousset F...

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American Congress on Surveying and Mapping

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The American Congress on Surveying and Mapping (ACSM) was an American professional association representing the interests of those engaged in measuring...

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ALS

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"Amyotrophic Lateral Sclerosis Genetic Studies: From Genome-wide Association Mapping to Genome Sequencing" (PDF). The Neuroscientist. 21 (6): 599–615...

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Soybean

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USDA Soybean Germplasm Collection and obtained mapping data that are expected to yield association mapping data for such traits. Rpp1-R1 is a resistance...

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Filename extension

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method suffers somewhat from the essentially global nature of the association mapping, as well as from developers' incomplete avoidance of extensions when...

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