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Taxonomic treatment information


Taxonomic treatment of Apis mellifera, Linnaeus 1758

A taxonomic treatment is a section in a scientific publication documenting the features of a related group of organisms or taxa.[1] Treatments have been the building blocks of how data about taxa are provided, ever since the beginning of modern taxonomy by Linnaeus 1753 for plants[2] and 1758 for animals.[3] Each scientifically described taxon has at least one taxonomic treatment. In today’s publishing, a taxonomic treatment tag[4]

is used to delimit such a section.[5] It allows to make this section findable, accessible, interoperable and reusable FAIR data. This is implemented in the Biodiversity Literature Repository, where upon deposition of the treatment a persistent DataCite digital object identifier (DOI) is minted. This includes metadata about the treatment, the source publication and other cited resources, such as figures cited in the treatment. This DOI allows a link from a taxonomic name usage to the respective scientific evidence provided by the author(s), both for human and machine consumption.

Treatments are considered data and thus copyright is not applicable[6] and thus can be made available even from closed access publications.

  1. ^ Catapano, Terry (2010). "TaxPub: An Extension of the NLM/NCBI Journal Publishing DTD for Taxonomic Descriptions". Proceedings of the Journal Article Tag Suite Conference 2010. 2010. doi:10.5281/zenodo.3484285.
  2. ^ Linnaeus, Carolus (1753). Species plantarum: exhibentes plantas rite cognitas, ad genera relatas, cum differentiis specificis, nominibus trivialibus, synonymis selectis, locis natalibus, secundum systema sexuale. Stockholm: Laurentis Salvius. doi:10.5281/zenodo.3931989.
  3. ^ Linnaeus, Carolus (1758). Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis. Stockholm: Laurentis Salvius. doi:10.5962/bhl.title.542.
  4. ^ Catapano, Terry (2010). "TaxPub: An Extension of the NLM/NCBI Journal Publishing DTD for Taxonomic Descriptions". Proceedings of the Journal Article Tag Suite Conference 2010. 2010. doi:10.5281/zenodo.3484285.
  5. ^ Penev, Lyubomir; Catapano, Terry; Agosti, Donat (2012). "Implementation of TaxPub, an NLM DTD extension for domain-specific markup in taxonomy, from the experience of a biodiversity publisher". Journal Article Tag Suite Conference (JATS-Con) Proceedings 2012. 2012. doi:10.5281/zenodo.804247.
  6. ^ Patterson, David J.; Egloff, Willi; Agosti, Donat; Eades, D; Franz, Niko; Hagedorn, Gregor; Rees, J.; Remsen, David P. (2012). "Scientific names of organisms: attribution, rights, and licensing". BMC Research Notes. 7 (79): 79. doi:10.1186/1756-0500-7-79. PMC 3922623. PMID 24495358.

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Taxonomic treatment

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underlying such a categorisation. Taxonomy organizes taxonomic units known as "taxa" (singular "taxon")." Taxonomy is different from meronomy, which deals...

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other related genera in the subtribe Plectranthinae. The most recent taxonomic treatment of the genus resurrected Coleus, and 212 names were changed from...

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Echinacea

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recognised. Historically, there has been much confusion over the taxonomic treatment of the genus, largely due to the ease with which the taxa hybridize...

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Genus

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Genus (/ˈdʒiːnəs/ pl.: genera /ˈdʒɛnərə/) is a taxonomic rank above species and below family as used in the biological classification of living and fossil...

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Trichocereus macrogonus

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Gardens, Kew. Retrieved 2023-09-25. Albesiano, Sofía (2012), "A New Taxonomic Treatment of the Genus Trichocereus (Cactaceae) in Chile", Haseltonia, 18:...

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Red colobus

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referred to as probably the most threatened taxonomic group of primates in Africa. If following the taxonomic treatment advocated in Mammal Species of the World...

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Leucanthemum vulgare

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Australia. Retrieved 22 January 2019. Thompson, Ian R. (2007). "A taxonomic treatment of tribe Anthemidae (Asteracea) in Australia". Muelleria. 25: 39–40...

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Canis lupus dingo

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In the taxonomic treatment presented in the third (2005) edition of Mammal Species of the World, Canis lupus dingo is a taxonomic rank that includes both...

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List of Araceae genera

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into approximately a hundred genera. The family's taxonomy remains in flux, and a full taxonomic treatment integrating the mass of phylogenetic data that...

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American toad

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charlesmithi) and the rare Hudson Bay toad (A. a. copei). Recent taxonomic treatments place this species in the genus Anaxyrus instead of Bufo. A. americanus...

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Leyland cypress

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(Cupressus nootkatensis). The taxonomic status of Nootka cypress has changed over time, and this has affected the taxonomic status of the hybrid. Nootka...

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List of birds of Antarctica

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include a total of 62 species, of which 1 is endemic. This list's taxonomic treatment (designation and sequence of orders, families and species) and nomenclature...

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Saguaro

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States and Mexican Boundary Survey, published in 1859. The next major taxonomic treatment came from The Cactaceae, the seminal work on cactus by Nathaniel...

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Helichrysum

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and implications for generic delimitation Wilson, P.G. (2016). "A taxonomic treatment of Chrysocephalum apiculatum and C. semipapposum (Asteraceae: Gnaphaliae)"...

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List of birds of Easter Island

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species, of which 6 have been introduced by humans. This list's taxonomic treatment (designation and sequence of orders, families and species) and nomenclature...

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Cheirotonus

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dark with orange patterning. Eight to ten species, depending on the taxonomic treatment, are recognized: C. battareli Pouillaude 1913 - northern Vietnam...

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List of birds of Japan

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are endemic, and 30 have been introduced by humans. This list's taxonomic treatment (designation and sequence of orders, families and species) and nomenclature...

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Artemia salina

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parts of Portugal, Spain, France, Italy and Morocco. An alternative taxonomic treatment is to recognize the extirpated English population as a species of...

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Sciurus

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in three. Their taxonomic treatment might also require Sciurus deppei to be moved to Notosciurus. A 2020 paper published on the taxonomy of Sciurinae split...

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Caspian Sea

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species and subspecies are endemic, as are 4–6 genera (depending on taxonomic treatment). The lake proper has 115 natives, including 73 endemics (63.5%)...

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Taxonomy of the burden of treatment

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The taxonomy of the burden of treatment is a visualization created for health care professionals to better comprehend the obstacles that interfere with...

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List of birds of Pakistan

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Pakistan Avicultural Foundation, one bird is endemic. This list's taxonomic treatment (designation and sequence of orders, families and species) and nomenclature...

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