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Rubredoxin information


Rubredoxin
rubredoxin domain ii from pseudomonas oleovorans
Identifiers
SymbolRubredoxin
PfamPF00301
Pfam clanCL0045
InterProIPR004039
PROSITEPDOC00179
SCOP27rxn / SCOPe / SUPFAM
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

Rubredoxins are a class of low-molecular-weight iron-containing proteins found in sulfur-metabolizing bacteria and archaea. Sometimes rubredoxins are classified as iron-sulfur proteins; however, in contrast to iron-sulfur proteins, rubredoxins do not contain inorganic sulfide. Like cytochromes, ferredoxins and Rieske proteins, rubredoxins are thought to participate in electron transfer in biological systems. Recent work in bacteria[1] and algae[2] have led to the hypothesis that some rubredoxins may instead have a role in delivering iron to metalloproteins.

  1. ^ Liu, F; Geng, J; Gumper, RH; Barman, A; Ozarowski, A; Hamelberg, D; Liu, A (June 2015). "An iron reservoir to the catalytic metal: The rubredoxin iron in an extradiol dioxygenase". The Journal of Biological Chemistry. 290 (25): 15621–15634. doi:10.1074/jbc.M115.650259. PMC 4505474. PMID 25918158. Retrieved 6 February 2023.
  2. ^ Calderon, RH; de Vitry, C; Wollman, FA; Niyogi, KK (February 2023). "Rubredoxin 1 promotes the proper folding of D1 and is not required for heme b559 assembly in Chlamydomonas photosystem II". The Journal of Biological Chemistry. 299 (3). doi:10.1016/j.jbc.2023.102968. PMC 9986647. PMID 36736898. Retrieved 6 February 2023.

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Rubredoxin

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Rubredoxins are a class of low-molecular-weight iron-containing proteins found in sulfur-metabolizing bacteria and archaea. Sometimes rubredoxins are...

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Rubredoxin A

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Investigation of the gene however indicates that it differs from other known rubredoxins in being bound to the thylakoid membrane via a C-terminal transmembrane...

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Metalloprotein

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function of inserting an oxygen atom into a C−H bond, an oxidation reaction. Rubredoxin is an electron-carrier found in sulfur-metabolizing bacteria and archaea...

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Pseudomonas oleovorans

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oleovorans is a Gram-negative, methylotrophic bacterium that is a source of rubredoxin (part of the hydroxylation-epoxidation system). It was first isolated...

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List of biophysically important macromolecular crystal structures

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protein digestion only after trypsin is released into the stomach. 1970 – Rubredoxin (PDB file 2rxn) was the first redox structure solved, a minimalist protein...

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Superoxide reductase

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toxic hydrogen peroxide (H2O2): reduced rubredoxin + O2− + 2 H+ ⇌ {\displaystyle \rightleftharpoons } rubredoxin + H2O2 Fe2+ + O2− + 2 H+ ⇌ {\displaystyle...

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Rubrerythrin

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where peroxide is reduced into two water molecules, and a mono-iron rubredoxin-like domain thought to be involved in electron transfer. A majority of...

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Iron

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ion cofactors. Some examples of iron metalloproteins are ferritin and rubredoxin. Many enzymes vital to life contain iron, such as catalase, lipoxygenases...

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Bioinorganic chemistry

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be organized into three major classes: iron–sulfur proteins (such as rubredoxins, ferredoxins, and Rieske proteins), blue copper proteins, and cytochromes...

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Density functional theory

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strong energy stabilization inside the hydrophobic core of small protein rubredoxin mediated by aromatic residues: correlated ab initio quantum chemical calculations"...

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Ruba

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director Ruba, Belarus Ruba Parish, Latvia Ullucus, a root vegetable Rubredoxin A, protein component of photosynthesis Ruba (fly), a genus of insects...

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Iron in biology

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ion cofactors. Some examples of iron metalloproteins are ferritin and rubredoxin. Many enzymes vital to life contain iron, such as catalase, lipoxygenases...

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Ferredoxin

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redox reactions. Other bioinorganic electron transport systems include rubredoxins, cytochromes, blue copper proteins, and the structurally related Rieske...

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Hydrocarbonoclastic bacteria

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membrane-bound oxygenase component and two soluble components called rubredoxin and rubredoxin reductase. From the oxidation of the methyl group of n-alkanes...

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Richard Ambler

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sequence bacterial electron-transfer proteins, primarily Cytochrome C and Rubredoxin from photosynthetic and other bacteria throughout his career and made...

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William Dale Phillips

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magnetic susceptibility, and Moessbauer studies of Clostridium pasteurianum rubredoxin. Nature (London, United Kingdom) (1970), 227(5258), 574-7. Phillips, W...

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Racemic crystallography

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Zawadzke and Jeremy Berg first used the small (45 amino acids) protein rubredoxin to synthesize it in racemic form. This was done since the structural determination...

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