Pseudomonas sRNA are non-coding RNAs (ncRNA) that were predicted by the bioinformatic program SRNApredict2. This program identifies putative sRNAs by searching for co-localization of genetic features commonly associated with sRNA-encoding genes and the expression of the predicted sRNAs was subsequently confirmed by Northern blot analysis. These sRNAs have been shown to be conserved across several pseudomonas species but their function is yet to be determined.[1] Using Tet-Trap genetic approach RNAT genes post-transcriptionally regulated by temperature upshift were identified: ptxS (implicated in virulence) and PA5194.[2]
^Livny, J.; Brencic, A.; Lory, S.; Waldor, K. (2006). "Identification of 17 Pseudomonas aeruginosa sRNAs and prediction of sRNA-encoding genes in 10 diverse pathogens using the bioinformatic tool sRNAPredict2" (Free full text). Nucleic Acids Research. 34 (12): 3484–3493. doi:10.1093/nar/gkl453. ISSN 0305-1048. PMC 1524904. PMID 16870723.
^Delvillani, Francesco; Sciandrone, Barbara; Peano, Clelia; Petiti, Luca; Berens, Christian; Georgi, Christiane; Ferrara, Silvia; Bertoni, Giovanni; Pasini, Maria Enrica (December 2014). "Tet-Trap, a genetic approach to the identification of bacterial RNA thermometers: application to Pseudomonas aeruginosa". RNA. 20 (12): 1963–1976. doi:10.1261/rna.044354.114. ISSN 1469-9001. PMC 4238360. PMID 25336583.
PseudomonassRNA are non-coding RNAs (ncRNA) that were predicted by the bioinformatic program SRNApredict2. This program identifies putative sRNAs by searching...
PseudomonassRNA P1 is a ncRNA that was predicted using bioinformatic tools in the genome of the opportunistic pathogen Pseudomonas aeruginosa and its...
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PseudomonassRNA P11 is a ncRNA that was predicted using bioinformatic tools in the genome of the opportunistic pathogen Pseudomonas aeruginosa and its...
PseudomonassRNA P24 is a ncRNA that was predicted using bioinformatic tools in the genome of the opportunistic pathogen Pseudomonas aeruginosa and its...
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materials. Despite the vague description, the type species, Pseudomonas pyocyanea (basionym of Pseudomonas aeruginosa), proved the best descriptor. Like most bacterial...
SrbA (sRNA regulator of biofilms A) is a small regulatory non-coding RNA identified in pathogenic Pseudomonas aeruginosa. It is important for biofilm...
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to some other Pseudomonas species, such as Pseudomonas aeruginosa, for example, which is an opportunistic pathogen. Based on 16S rRNA analysis, P. putida...
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such as the NCPPB, ICMP, and others. Pseudomonas syringae is a member of the genus Pseudomonas, and based on 16S rRNA analysis, it has been placed in the...
Pseudomonas fluorescens is a common Gram-negative, rod-shaped bacterium. It belongs to the Pseudomonas genus; 16S rRNA analysis as well as phylogenomic...
Cystoviridae. It infects Pseudomonas bacteria (typically plant-pathogenic P. syringae). It has a three-part, segmented, double-stranded RNA genome, totalling...
the species Pseudomonas ficuserectae and Pseudomonas meliae, and 27 pathovars of Pseudomonas syringae/Pseudomonas savastanoi, constituting a single, well-defined...
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protein of HIV P24 protein family, a group of transmembrane proteins PseudomonassRNA P24 Maltese patrol boat P24, of the Armed Forces of Malta Ndonde language...
toluene. Based on 16S rRNA analysis, P. mendocina has been placed in the P. aeruginosa group. Aragone; et al. (Jun 1992). "Pseudomonas mendocina, an environmental...
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