Pedobacter is a genus of Gram-negative soil-associated bacteria. Species including Pedobacter heparinus, formerly known as Flavobacterium heparinum, produce heparinase and are capable of using heparin as their sole carbon and nitrogen source.[1]
In molecular biology, Pedobacter has also been identified as a contaminant of DNA extraction kit reagents and ultra-pure water systems, which may lead to its erroneous appearance in microbiota or metagenomic datasets.[2]
^Shaya, D (2006). "Crystal structure of heparinase II from Pedobacter heparinus and its complex with a disaccharide product". J. Biol. Chem. 281 (22): 15525–35. doi:10.1074/jbc.m512055200. PMID 16565082.
^Salter, S; Cox, M; Turek, E; Calus, S; Cookson, W; Moffatt, M; Turner, P; Parkhill, J; Loman, N; Walker, A (2014). "Reagent contamination can critically impact sequence-based microbiome analyses". bioRxiv 10.1101/007187.
Pedobacter lentus is a species of Gram-negative, non-motile, pleomorphic bacteria. Its type strain is DS-40(T) (=KCTC 12875(T) =JCM 14593(T)). Yoon JH...
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Holben, W. E.; Gannon, J. E. (2009). "Pedobacter nyackensis sp. nov., Pedobacter alluvionis sp. nov. and Pedobacter borealis sp. nov., isolated from Montana...
Pedobacter ginsengisoli is a species of bacteria first isolated from a ginseng field, hence its name. It is Gram-negative, strictly aerobic, rod-shaped...
Pedobacter terricola is a species of Gram-negative, non-motile, pleomorphic bacteria. Its type strain is DS-45(T) (=KCTC 12876(T) =JCM 14594(T)). Yoon...
Pedobacter cryoconitis is a species of bacteria. It is facultatively psychrophilic, Gram-negative, aerobic and rod-shaped strain, having been first isolated...
Pedobacter agri is a species of Gram-negative bacteria. Its genome has been sequenced. Its type strain is PB92(T) (=KCTC 12511(T) =DSM 19486(T)). Lee,...
Holben, W. E.; Gannon, J. E. (2009). "Pedobacter nyackensis sp. nov., Pedobacter alluvionis sp. nov. and Pedobacter borealis sp. nov., isolated from Montana...
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zeaxanthinifaciens Binomial name Nubsella zeaxanthinifaciens Asker et al. 2008 Type strain CCUG 54348, NBRC 102579, TDMA-5 Synonyms Pedobacter zeaxanthinifaciens...
to digest heparin or HS are naturally produced by the soil bacterium Pedobacter heparinus (formerly named Flavobacterium heparinum). This bacterium is...
isolated from coking wastewater activated sludge, and reclassification of Pedobacter saltans as Pseudopedobacter saltans comb. nov". International Journal...
Sappinia strains tested harbored distinct species of Flavobacterium and/or Pedobacter, which are not known to be commensals of any other free-living amoebae...
Cryoconitis may refer to: Arthrobacter cryoconiti, species of bacteria Pedobacter cryoconitis, species of bacteria Polaromonas cryoconiti, species of bacteria...
isolated from coking wastewater activated sludge, and reclassification of Pedobacter saltans as Pseudopedobacter saltans comb. nov". International Journal...
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