For the NeXus format used in neutron, x-ray, and muon scattering, see Nexus (data format).
Nexus format
Filename extensions
usually .nex or .nxs
Internet media type
application/octet-stream
Magic number
'#NEXUS\n'
Developed by
Maddison DR, Swofford DL, Maddison WP
Initial release
December 1997 (26 years ago) (1997-12)
Type of format
bioinformatics
Open format?
Yes
The extensible NEXUS file format is widely used in bioinformatics. It stores information about taxa, morphological and molecular characters, distances, genetic codes, assumptions, sets, trees, etc.[1] Several popular phylogenetic programs such as PAUP*,[2] MrBayes,[3] Mesquite,[4] MacClade[5] and SplitsTree[6] use this format.
^Maddison DR, Swofford DL, Maddison WP (1997). "NEXUS: An extensible file format for systematic information". Systematic Biology. 46 (4): 590–621. doi:10.1093/sysbio/46.4.590. PMID 11975335.
^PAUP* Archived 2006-09-03 at the Wayback Machine — Phylogenetic Analysis Using Parsimony *and other methods
^MrBayes
^Mesquite: A modular system for evolutionary analysis
^MacClade
^ Huson and Bryant, Application of Phylogenetic Networks in Evolutionary Studies, Mol Biol Evol (2005) 23 (2): 254-267. https://doi.org/10.1093/molbev/msj030
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