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MassMatrix is a mass spectrometry data analysis software that uses a statistical model to achieve increased mass accuracy over other database search algorithms.[1] This search engine is set apart from others dues to its ability to provide extremely efficient judgement between true and false positives for high mass accuracy data that has been obtained from present day mass spectrometer instruments. It is useful for identifying disulphide bonds in tandem mass spectrometry data.[2] This search engine is set apart from others due to its ability to provide extremely efficient judgement between true and false positives for high mass accuracy data that has been obtained from present day mass spectrometer instruments.[3]

  1. ^ Cite error: The named reference Xu1 was invoked but never defined (see the help page).
  2. ^ Cite error: The named reference Xu2 was invoked but never defined (see the help page).
  3. ^ Xu, Hua; Hsu, Pang-Hung; Zhang, Liwen; Tsai, Ming-Daw; Freitas, Michael A. (2010-07-02). "Database Search Algorithm for Identification of Intact Cross-Links in Proteins and Peptides Using Tandem Mass Spectrometry". Journal of Proteome Research. 9 (7): 3384–3393. doi:10.1021/pr100369y. ISSN 1535-3893. PMC 4141472. PMID 20469931.

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