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SNPedia information


SNPedia
Content
Descriptiona wiki of human single-nucleotide polymorphisms and genotypes
Data types
captured
single-nucleotide polymorphisms, genotypes, genes, variation
OrganismsHomo sapiens
Contact
Primary citationPMID 22140107
Access
Websitewww.snpedia.com
Download URLwww.snpedia.com/index.php/Bulk
Web service URLbots.snpedia.com/api.php
Miscellaneous
LicenseCreative Commons Attribution-Noncommercial-Share Alike 3.0 United States License
Curation policywiki

SNPedia (pronounced "snipedia") is a wiki-based bioinformatics web site that serves as a database of single nucleotide polymorphisms (SNPs). Each article on a SNP provides a short description, links to scientific articles and personal genomics web sites, as well as microarray information about that SNP. Thus SNPedia may support the interpretation of results of personal genotyping from, e.g., 23andMe and similar companies.[1]

SNPedia is a semantic wiki, powered by MediaWiki and the Semantic MediaWiki extension.

SNPedia was created, and is run by, geneticist Greg Lennon[2] and programmer Mike Cariaso,[3] who at the time of the site's founding were both located in Bethesda, Maryland.[4]

As of 27 June 2019, the website has 537 medical conditions[5] and 109,729 SNPs in its database.[6] The number of SNPs in SNPedia has doubled roughly once every 14 months since August 2007.[7]

On 7 September 2019, MyHeritage announced that they acquired both SNPedia and Promethease. All non-European raw genetic data files previously uploaded to Promethease, and not deleted by users by 1 Nov 2019, are to be copied to MyHeritage and the users will receive a free MyHeritage account with paid level of services, including Cousin Matching and Ethnicities.[8]

  1. ^ Michael Cariaso (2007-12-17). "SNPedia: A Wiki for Personal Genomics". Bio-IT World.
  2. ^ John Carey (2008-10-23). "Is Genetic Testing Really Good for Your Health?". LEX18.[permanent dead link]
  3. ^ Daniel MacArthur (2008-11-05). "Nature special issue on personal genomics". scienceblogs.com. Archived from the original on 2008-11-09. Retrieved 2008-11-06.
  4. ^ "Genes R Us". Science. 319 (5860): 139. 11 January 2008. doi:10.1126/science.319.5860.139b. S2CID 1780817.
  5. ^ "Category:Is a medical condition - SNPedia". www.snpedia.com. Retrieved 2019-06-27.
  6. ^ "SNPedia:FAQ".
  7. ^ SNPedia: a wiki supporting personal genome annotation, interpretation and analysis[dead link], Michael Cariaso and Greg Lennon, Nucleic Acids Research, 2011, 1–5
  8. ^ "MyHeritage Acquires Promethease and SNPedia". www.businesswire.com. 2019-09-07. Retrieved 2019-09-09.

and 26 Related for: SNPedia information

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SNPedia

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SNPedia (pronounced "snipedia") is a wiki-based bioinformatics web site that serves as a database of single nucleotide polymorphisms (SNPs). Each article...

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Alcohol flush reaction

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PMID 18033686. "rs671 is a classic SNP (Single Nucleotide Polymorphism)". SNPedia. 18 November 2020. Archived from the original on 2018-10-22. "Esophageal...

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Factor V Leiden

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Leiden, Arg506Gln, R506Q, G1691A Gene Factor V Chromosome 1 External databases Ensembl Human SNPView dbSNP 6025 HapMap 6025 SNPedia 6025 ALFRED SI001216K...

Word Count : 2524

Venlafaxine

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3109/00048679809062742. PMID 9588310. S2CID 34824025. "Rs2032583 -SNPedia". Snpedia.com. Archived from the original on 11 December 2013. Retrieved 21...

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Pharmacogenomics

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Biomarkers in Drug Labeling". FDA. 18 August 2021. "SNPedia". Cariaso M, Lennon G (January 2012). "SNPedia: a wiki supporting personal genome annotation, interpretation...

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Genealogical DNA test

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August 2019. Retrieved 8 August 2019. "List of medical conditions – SNPedia". www.snpedia.com. Retrieved 27 June 2019. "The Pros and Cons of the Main Autosomal...

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MyHeritage

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On September 7, 2019, MyHeritage announced that they had acquired both SNPedia and Promethease. All non-European raw genetic data files previously uploaded...

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List of wikis

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Scholarpedia". www.scholarpedia.org. Retrieved 2021-05-01. "Statistics". SNPedia. Archived from the original on February 10, 2016. Retrieved April 21, 2016...

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MediaWiki

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MediaWiki. Other public wikis that run on MediaWiki include wikiHow and SNPedia. WikiLeaks began as a MediaWiki-based site, but is no longer a wiki. A...

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Prothrombin G20210A

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SNP: rs1799963 Gene F2 Chromosome 11 External databases Ensembl Human SNPView dbSNP 1799963 HapMap 1799963 SNPedia 1799963...

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List of major Creative Commons licensed works

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OpenStreetMap Wiki". wiki.openstreetmap.org. Retrieved 7 July 2018. "SNPedia:Copyrights". SNPedia. Retrieved November 15, 2013. Michael Mrozek (2016-11-20). "Power...

Word Count : 1895

Rs4680

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Region Exon 3 External databases Ensembl Human SNPView dbSNP 4680 HapMap 4680 SNPedia 4680 AlzGene Meta-analysis Overview SzGene Meta-analysis Overview...

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Hyperhomocysteinemia

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doi:10.1371/journal.pone.0033222. PMC 3310006. PMID 22470444. https://www.snpedia.com/index.php/rs1801131 consulted 30.10.2023 Kang, S. S.; Wong, P. W. (1996-01-26)...

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Rs6265

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Chromosome 11 External databases Ensembl Human SNPView dbSNP 6265 HapMap 6265 SNPedia 6265 AlzGene Meta-analysis Overview SzGene Meta-analysis Overview PDGene...

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Rs6313

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Exon 1 External databases Ensembl Human SNPView dbSNP 6313 HapMap 6313 SNPedia 6313 ALFRED SI000324J AlzGene Meta-analysis Overview SzGene Meta-analysis...

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Rs1801133

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1 External databases Ensembl Human SNPView dbSNP 1801133 HapMap 1801133 SNPedia 1801133 AlzGene Meta-analysis Overview SzGene Meta-analysis Overview...

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Rs16891982

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0104367. ISSN 1932-6203. PMC 4122405. PMID 25093503. "rs16891982 - SNPedia". www.snpedia.com. Retrieved 2022-10-01. "rs16891982 RefSNP Report - dbSNP - NCBI"...

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Rs6311

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A-1438G, G-1438A Gene HTR2A Chromosome 13 External databases Ensembl Human SNPView dbSNP 6311 HapMap 6311 SNPedia 6311 SzGene Meta-analysis Overview...

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Ionone

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Organic Syntheses. 23: 78. doi:10.15227/orgsyn.023.0078. "rs6591536". SNPedia. Jaeger SR, McRae JF, Bava CM, Beresford MK, Hunter D, Jia Y, Chheang SL...

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Rs6314

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H452Y Gene HTR2A Chromosome 13 Region Exon 3 External databases Ensembl Human SNPView dbSNP 6314 HapMap 6314 SNPedia 6314 SzGene Meta-analysis Overview...

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Rs6295

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rs6295 Name(s) C-1019G, C(-1019)G Gene HTR1A Chromosome 5 Region Promoter External databases Ensembl Human SNPView dbSNP 6295 HapMap 6295 SNPedia 6295...

Word Count : 814

Familial natural short sleep

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"rs121912617 RefSNP Report - dbSNP - NCBI". dbSNP. "rs121912617 - SNPedia". www.snpedia.com. Retrieved 2022-10-14. Pellegrino, Renata; Kavakli, Ibrahim...

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Rs1800955

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Region Promoter External databases Ensembl Human SNPView dbSNP 1800955 HapMap 1800955 SNPedia 1800955 ALFRED SI000215I SzGene Meta-analysis Overview...

Word Count : 323

DbSNP

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NCBI database of genetic variation. Nucleic Acids Research, 29: 308-311. SNPedia HapMap NCBI NHGRI Wheeler DL, Barrett T, Benson DA, et al. (January 2007)...

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Apolipoprotein E

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SNP: rs429358 Gene ApoE Chromosome 19 External databases Ensembl Human SNPView dbSNP 429358 HapMap 429358 SNPedia 429358...

Word Count : 6460

Rs28363170

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SNP: rs28363170 Gene SLC6A3 Chromosome 5 External databases Ensembl Human SNPView dbSNP 28363170 HapMap 28363170 SNPedia 28363170...

Word Count : 146

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